EST details — SGN-C31440
| Search information |
| Request: 31440 | Match: SGN-C31440 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C31440 | Clone name: cLEG-13-K6 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180527 is on microarray TOM1: SGN-S1-1-4.2.19.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180527 [TUS-34-J13] | Trace: SGN-T187082 | EST: SGN-E375180 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180527 [TUS-34-J13] | Trace: SGN-T187083 | EST: SGN-E375181 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E250923 | Length: 653 bp (885 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E250923 [] (trimmed)
AGTTAATTTTCAAATGGGTTCAACATACCTTAACACGCATGATTCCAAAGGAGTGTTTCATGATCCAGAAAGGATAAAAAATACGATACAAGTAT
CTCAAAGGATGGTTAAGAAGTTTTTTGAAATTCTAAGCATGACAGACAACCATGGAGATTTTTCAATCTCACCACAGTTAAATCGTGGAGATAGG
ATTTCAATAGTAAAAAATGAAGAAACTATCCAACCAAAAGGCTTTATTGCCATTGCAACTACTTCTCTATGGCTTCCTCTTTCATTCCAAGATGT
CTTCAGTTTCTTCAATGATTACAAGACAAGAAATCAGTGGGATATTTTGACTGGTGGAAATAATGTGATTGAATTAGATCGAGTACTAACAGGAA
CTTTTCCGGGAAACAACATTACAATTATTCAGCCTTATAATATGCATAAAGAAATGTTAGTGCTTGAAGAGACGAGTATTGATGAAATGGGAGCA
TTTTTAGTCTATGCACCCATAGATTTACGAGCAATCAATTCAATTGTCAATGGAGGTGAAGCAACGAAAGTTCCCATTTTGCCCTCTGGTATCAT
CATAAGTCCCGATGGTCGTCTCTCCTCGAATAGGGACAGCACTGCAAATGCACAAAATGGTTCAATTTTGACAGTGACATTTC
CTCAAAGGATGGTTAAGAAGTTTTTTGAAATTCTAAGCATGACAGACAACCATGGAGATTTTTCAATCTCACCACAGTTAAATCGTGGAGATAGG
ATTTCAATAGTAAAAAATGAAGAAACTATCCAACCAAAAGGCTTTATTGCCATTGCAACTACTTCTCTATGGCTTCCTCTTTCATTCCAAGATGT
CTTCAGTTTCTTCAATGATTACAAGACAAGAAATCAGTGGGATATTTTGACTGGTGGAAATAATGTGATTGAATTAGATCGAGTACTAACAGGAA
CTTTTCCGGGAAACAACATTACAATTATTCAGCCTTATAATATGCATAAAGAAATGTTAGTGCTTGAAGAGACGAGTATTGATGAAATGGGAGCA
TTTTTAGTCTATGCACCCATAGATTTACGAGCAATCAATTCAATTGTCAATGGAGGTGAAGCAACGAAAGTTCCCATTTTGCCCTCTGGTATCAT
CATAAGTCCCGATGGTCGTCTCTCCTCGAATAGGGACAGCACTGCAAATGCACAAAATGGTTCAATTTTGACAGTGACATTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E250923] | SGN-U563794 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T66402 [Download][View] | Facility Assigned ID: TBFBX63TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0084 | Quality Trim Threshold: 14.5 |
Working
