EST details — SGN-C31723
| Search information |
| Request: 31723 | Match: SGN-C31723 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C31723 | Clone name: cLEG-15-D21 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180565 is on microarray TOM1: SGN-S1-1-6.4.19.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180565 [TUS-34-L3] | Trace: SGN-T187088 | EST: SGN-E375186 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180565 [TUS-34-L3] | Trace: SGN-T187089 | EST: SGN-E375187 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E251744 | Length: 607 bp (989 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E251744 [] (trimmed)
CGGATGGGAGACACCGATTCATGTCGATGCTGCGAGTGGAGGATTTATTGCTCCTTTCCTCTGGCCAGATCTTGAATGGGATTTCCGTTTGCCTC
TTGTGAAAAGTATAAATGTCAGCGGTCACAAGTATGGCCTTGTATATGCTGGTGTCGGTTGGGTGATATGGCGGAGCAAGGAAGACTTGCCCGAT
GAACTCGTCTTTCATATAAACTACCTTGGGTCTGATCAGCCTACTTTTACTCTCAACTTCTCTAAAGGTTCCTATCAAATAATTGCACAGTATTA
TCAGTTAATAAGACTTGGCTTTGAGATAGATTGTGTACAATAGACCCTTGTGGTTCGGCCTTCTCCGGATCCTGCATGTAGCGGGAGCTTTAGTA
AACGGGGTTGTCCCTTTTTTCTACACTACCCTTTTTTCTATCATTTGTTAATATAAGTCGAAAGCTGAGACTCTTCAGGGGCAATTTTTTTAGAT
CTTATGTCGTGCTTCCTATGATTATGCAGAACGCCTTTGAATTTAGAACACATTTTACCCATAAAGAGTTATGGAGTAAAACAGTGGAATATTTA
AATGATGTTTGTCAACAGCTATTTTCCTTCTGAATTC
TTGTGAAAAGTATAAATGTCAGCGGTCACAAGTATGGCCTTGTATATGCTGGTGTCGGTTGGGTGATATGGCGGAGCAAGGAAGACTTGCCCGAT
GAACTCGTCTTTCATATAAACTACCTTGGGTCTGATCAGCCTACTTTTACTCTCAACTTCTCTAAAGGTTCCTATCAAATAATTGCACAGTATTA
TCAGTTAATAAGACTTGGCTTTGAGATAGATTGTGTACAATAGACCCTTGTGGTTCGGCCTTCTCCGGATCCTGCATGTAGCGGGAGCTTTAGTA
AACGGGGTTGTCCCTTTTTTCTACACTACCCTTTTTTCTATCATTTGTTAATATAAGTCGAAAGCTGAGACTCTTCAGGGGCAATTTTTTTAGAT
CTTATGTCGTGCTTCCTATGATTATGCAGAACGCCTTTGAATTTAGAACACATTTTACCCATAAAGAGTTATGGAGTAAAACAGTGGAATATTTA
AATGATGTTTGTCAACAGCTATTTTCCTTCTGAATTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E251744] | SGN-U581226 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T66758 [Download][View] | Facility Assigned ID: TBFCG23TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0072 | Quality Trim Threshold: 20.5 |
Working
