EST details — SGN-C32399
| Search information |
| Request: 32399 | Match: SGN-C32399 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C32399 | Clone name: cLEG-1-E9 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183685 is on microarray TOM1: SGN-S1-1-6.2.1.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183685 [TUS-42-N3] | Trace: SGN-T196101 | EST: SGN-E394775 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183685 [TUS-42-N3] | Trace: SGN-T196101 | EST: SGN-E399414 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183685 [TUS-42-N3] | Trace: SGN-T200382 | EST: SGN-E399415 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248363 | Length: 638 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248363 [] (trimmed)
GGGAAAGTAATCCATTCAATGGATTATTCAAAGATGGACTCCACAACTGCAACCGCCTTTGTCAAAGGAAAACATGTAGCGGTCGTTGGATTCCA
AAAATCAGGACTGGACATTGCCATGGAGTCCTCCACAGTAAATGGGGTTGAACGTCCGTGCACCGTAGTAGTCAGGACACCACATTGGAACGTTC
CTGATTATTTCCCTTGGGGATTCCCAATGGCAAAACTCTATTTGAATAGATTCTCAGAACTTACAGTGCATAAACCTGGTGAAGGCCTTCTTTTA
TATCTCATTGCTACAATTCTCTCGCCTCTGAGGTGGGGCTTCTCAAAGTTTGTGGAAAGCTATATAAAACACAAGCTCAGGCTTTCAAAGCACGG
GATGGTGCCAGATCATAGTTTCTTAAACGAATTGAGTGCCTGCTTAATTTCTACAGTGCCTCAGGGCTTCTACGACAGAGTTGAGGAAGGACGTC
TCAAACTAAAGAAAGCCAAGAGTTTTGGATTTACCAAACAAGGCATTGTGCTAGAGGGTCAGGCTGAACCCATTAAATCTGACTTAGTCATACTC
GCCACAGGCTTCAGGGGAATTGATAAGCTCAAACACATTTTTGAATCACCAAAATATCAGCAACTCAT
AAAATCAGGACTGGACATTGCCATGGAGTCCTCCACAGTAAATGGGGTTGAACGTCCGTGCACCGTAGTAGTCAGGACACCACATTGGAACGTTC
CTGATTATTTCCCTTGGGGATTCCCAATGGCAAAACTCTATTTGAATAGATTCTCAGAACTTACAGTGCATAAACCTGGTGAAGGCCTTCTTTTA
TATCTCATTGCTACAATTCTCTCGCCTCTGAGGTGGGGCTTCTCAAAGTTTGTGGAAAGCTATATAAAACACAAGCTCAGGCTTTCAAAGCACGG
GATGGTGCCAGATCATAGTTTCTTAAACGAATTGAGTGCCTGCTTAATTTCTACAGTGCCTCAGGGCTTCTACGACAGAGTTGAGGAAGGACGTC
TCAAACTAAAGAAAGCCAAGAGTTTTGGATTTACCAAACAAGGCATTGTGCTAGAGGGTCAGGCTGAACCCATTAAATCTGACTTAGTCATACTC
GCCACAGGCTTCAGGGGAATTGATAAGCTCAAACACATTTTTGAATCACCAAAATATCAGCAACTCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248363] | SGN-U578738 | Tomato 200607 | Build 2 | 130 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64426 [Download][View] | Facility Assigned ID: TBFAA29TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 14.5 |
Working
