EST details — SGN-C32421
| Search information |
| Request: 32421 | Match: SGN-C32421 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C32421 | Clone name: cLEG-1-G9 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183563 is on microarray TOM1: SGN-S1-1-8.1.2.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183563 [TUS-42-I1] | Trace: SGN-T195490 | EST: SGN-E394164 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183563 [TUS-42-I1] | Trace: SGN-T195956 | EST: SGN-E394630 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183563 [TUS-42-I1] | Trace: SGN-T195956 | EST: SGN-E399161 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183563 [TUS-42-I1] | Trace: SGN-T200243 | EST: SGN-E399162 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248368 | Length: 624 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248368 [] (trimmed)
TTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGC
TCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAA
ATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATA
GTCACTCCTGACAAAGAAGGACCAGATTGTGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGT
CACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTG
CTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTA
CCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCAC
TCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAA
ATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATA
GTCACTCCTGACAAAGAAGGACCAGATTGTGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGT
CACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTG
CTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTA
CCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248368] | SGN-U579280 | Tomato 200607 | Build 2 | 174 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64431 [Download][View] | Facility Assigned ID: TBFAA41TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0056 | Quality Trim Threshold: 14.5 |
Working
