EST details — SGN-C32468
| Search information |
| Request: 32468 | Match: SGN-C32468 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C32468 | Clone name: cLEG-1-M7 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183457 is on microarray TOM1: SGN-S1-1-2.4.1.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183457 [TUS-42-D15] | Trace: SGN-T196191 | EST: SGN-E394865 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183457 [TUS-42-D15] | Trace: SGN-T196191 | EST: SGN-E399352 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183457 [TUS-42-D15] | Trace: SGN-T200343 | EST: SGN-E399353 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248382 | Length: 609 bp (865 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248382 [] (trimmed)
TTTTTTTTTCGAGTAACTATATATATGTTATATATTATGGGTCAAACTTAAAAGGGAGGAAGTTGAACTCATTCTATATATATCACTTTCAAATA
TAGATCAATCCTAGCCATTAGATTGACCTAAATCAAGGGTCCTAATTAATCTCACAACCCTTTTTCCCAACTAACACAAGAAATAAAATAAATTA
AGACAATTTCTATTTTTTTTCTTTTATCTCTGCTGTTCCATCATAAGACAGAAATCGTCGAAGCAGACGAATCCATCTCCATTTTTATCTACACT
TGTTATCATACGCTTACATTCCTCTAACGTGCACCGTTCATCGCCGATCATTCTAAACACGTTAAACAATTCCTCACCGGTGATTTTCCCGTCGT
GATCCTCATCGAAGAAATCAAACGCATCTCTCATCTCACCTGCATCTCCCGCTGCCGACGTCGGTGTCGACTCAAACGCCGAGGTAATAGTTTCA
AAATTCTCTAAACTAATACATCCATCTCCGTTCTCATCCAATTCATCAAGCAACAACACAAGTTCCTCTTCACTCGGTGGAGATTTACCTCCAAC
TCTGCTTAAAATCGCTTCGAATTTCTCCTTCTTAATCTT
TAGATCAATCCTAGCCATTAGATTGACCTAAATCAAGGGTCCTAATTAATCTCACAACCCTTTTTCCCAACTAACACAAGAAATAAAATAAATTA
AGACAATTTCTATTTTTTTTCTTTTATCTCTGCTGTTCCATCATAAGACAGAAATCGTCGAAGCAGACGAATCCATCTCCATTTTTATCTACACT
TGTTATCATACGCTTACATTCCTCTAACGTGCACCGTTCATCGCCGATCATTCTAAACACGTTAAACAATTCCTCACCGGTGATTTTCCCGTCGT
GATCCTCATCGAAGAAATCAAACGCATCTCTCATCTCACCTGCATCTCCCGCTGCCGACGTCGGTGTCGACTCAAACGCCGAGGTAATAGTTTCA
AAATTCTCTAAACTAATACATCCATCTCCGTTCTCATCCAATTCATCAAGCAACAACACAAGTTCCTCTTCACTCGGTGGAGATTTACCTCCAAC
TCTGCTTAAAATCGCTTCGAATTTCTCCTTCTTAATCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248382] | SGN-U581707 | Tomato 200607 | Build 2 | 43 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64445 [Download][View] | Facility Assigned ID: TBFAA76TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0062 | Quality Trim Threshold: 20.5 |
Working
