EST details — SGN-C32477
| Search information |
| Request: 32477 | Match: SGN-C32477 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C32477 | Clone name: cLEG-1-O3 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183463 is on microarray TOM1: SGN-S1-1-4.4.1.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183463 [TUS-42-D21] | Trace: SGN-T200345 | EST: SGN-E399356 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183463 [TUS-42-D21] | Trace: SGN-T200346 | EST: SGN-E399357 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248385 | Length: 598 bp (856 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248385 [] (trimmed)
TCAGATCAGCTGCTTACTCCAACTGCGCGCGCAAACCATCCTGATATTCCCTAAACTTCCTTCCTTAAAGCGTCAATAGACGCAACCAAAAAAAA
AAAACAAAAAAATAATTTCTGCTTTCAGTTTCTTCTTTTGTAAAACCCTCACTCCTTTTCTTCCTTCTTTTACTACTTCCTGCTTTTGCACTCAT
TGCTTTGAACATTTTCCGCTTTAACTTCCTTTGCTGTTGTGAACTTTTTCATAATGGAAATGGACTTGCCAGTTTCTGCCATTGGTTTTGAAGGT
TTCGAAAAGAGGCTCGAAATTTCTTTCGTCGAGCCTGGTCTGTTTGCTGATCCTAATGGAAAAGGACTTCGATCTCTCACAAAGGCACAGTTGGA
TGAAATTCTCGGACCTGCTGAGTGCACCATTGTTGATAACCTGTCAAATGACTATGTTGATTCCTATGTGCTGTCCGAGTCGAGCCTCTTCGTTT
ATTCTTACAAGATAATCATCAAAACATGTGGTACCACAAAGCTGCTTCTTGCAATTCCGCCCATTCTGAGGTTGGCTGAGACCTTGTCTCTCAAA
GTACAAGACGTGAGGTATACCCGTGGGA
AAAACAAAAAAATAATTTCTGCTTTCAGTTTCTTCTTTTGTAAAACCCTCACTCCTTTTCTTCCTTCTTTTACTACTTCCTGCTTTTGCACTCAT
TGCTTTGAACATTTTCCGCTTTAACTTCCTTTGCTGTTGTGAACTTTTTCATAATGGAAATGGACTTGCCAGTTTCTGCCATTGGTTTTGAAGGT
TTCGAAAAGAGGCTCGAAATTTCTTTCGTCGAGCCTGGTCTGTTTGCTGATCCTAATGGAAAAGGACTTCGATCTCTCACAAAGGCACAGTTGGA
TGAAATTCTCGGACCTGCTGAGTGCACCATTGTTGATAACCTGTCAAATGACTATGTTGATTCCTATGTGCTGTCCGAGTCGAGCCTCTTCGTTT
ATTCTTACAAGATAATCATCAAAACATGTGGTACCACAAAGCTGCTTCTTGCAATTCCGCCCATTCTGAGGTTGGCTGAGACCTTGTCTCTCAAA
GTACAAGACGTGAGGTATACCCGTGGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248385] | SGN-U580064 | Tomato 200607 | Build 2 | 541 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64448 [Download][View] | Facility Assigned ID: TBFAA86TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0008 | Quality Trim Threshold: 14.5 |
Working
