EST details — SGN-C32794
| Search information |
| Request: 32794 | Match: SGN-C32794 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C32794 | Clone name: cLEG-24-A11 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180328 is on microarray TOM1: SGN-S1-1-3.2.19.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180328 [TUS-34-B6] | Trace: SGN-T187286 | EST: SGN-E375518 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180328 [TUS-34-B6] | Trace: SGN-T187287 | EST: SGN-E375519 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E253477 | Length: 616 bp (1097 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E253477 [] (trimmed)
GTGGGCTAATTCTCCCATTTATCAAACATGTAAGCTTATTTTTATTCAATTTTCCTTCAACGTTTATTGATCAAAGTTACAATGACATAGTTTCT
TTTTATGGTATTTGACAATAGGCAAAAAAAATTACCTTCAAGAAGCCAATTGGTAGTATTTCAATTTCAGGGCACAAATTCTTGGGATGTCCAAT
GCCTTGTGGCATTCAGATAACAAGGAAAACTTATGTTAGTACCCACTCAAAAATTGAGTATATTAATTCCACAGATGCTACAATTTCTGGTAGTC
GAAATGGATTTACACCAATATTCTTATGGTACTGTTTAAGCAAGAAAGGACATGCTAGATTGCAACAAGATTCCATAACATGCATTGAAAATGCT
CGGTATTTGAAAGATCGACTTCTTGAAGCAGGAATTAGTGTTATGCTGAATGAGTTTAGTATTACTGTTATTTTTGAACGATCTTGTGACCATAA
ATTCATTCATCGTTGGAACTTGTGTTACTTAAGAGGCATGGCACATGTTGTGGTTATGCCAGGTATTACAAGAGAAACTATAGACAGTTTCTTCA
AAGATCTAATGCAAGAGAGGAAGAGGTGGTTTCAGGATGGAAAAAC
TTTTATGGTATTTGACAATAGGCAAAAAAAATTACCTTCAAGAAGCCAATTGGTAGTATTTCAATTTCAGGGCACAAATTCTTGGGATGTCCAAT
GCCTTGTGGCATTCAGATAACAAGGAAAACTTATGTTAGTACCCACTCAAAAATTGAGTATATTAATTCCACAGATGCTACAATTTCTGGTAGTC
GAAATGGATTTACACCAATATTCTTATGGTACTGTTTAAGCAAGAAAGGACATGCTAGATTGCAACAAGATTCCATAACATGCATTGAAAATGCT
CGGTATTTGAAAGATCGACTTCTTGAAGCAGGAATTAGTGTTATGCTGAATGAGTTTAGTATTACTGTTATTTTTGAACGATCTTGTGACCATAA
ATTCATTCATCGTTGGAACTTGTGTTACTTAAGAGGCATGGCACATGTTGTGGTTATGCCAGGTATTACAAGAGAAACTATAGACAGTTTCTTCA
AAGATCTAATGCAAGAGAGGAAGAGGTGGTTTCAGGATGGAAAAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E253477] | SGN-U580314 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67725 [Download][View] | Facility Assigned ID: TBFDO06TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.944 | Expected Error Rate: 0.0044 | Quality Trim Threshold: 12.5 |
Working
