EST details — SGN-C33556
| Search information |
| Request: 33556 | Match: SGN-C33556 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C33556 | Clone name: cLEG-27-F11 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180436 is on microarray TOM1: SGN-S1-1-7.2.19.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180436 [TUS-34-F18] | Trace: SGN-T187313 | EST: SGN-E375545 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180436 [TUS-34-F18] | Trace: SGN-T187314 | EST: SGN-E375546 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E254420 | Length: 573 bp (989 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E254420 [] (trimmed)
CAAATGCTGCTCCATCAAAAGGGTTAGATCTTGACAAGACATCACTGGGCTGGAGATCTGAATGTAACAGTGGATGGAGATACTTGAGGACTTTA
TGCAGAGCCGAGCTTTTCGCTGGAAAAGTATTGGAGTCTCAAGCTTGTCTGAGGGAGAAAAAAAGTGATGGAATTGGTAGAATTCTTGAGGTCAA
AAGAAGGTCAAGTGGTGAATATTGGAGAGCTAGTCTTTGCAACTGTGATGAACATGCTGGGTAATGTTCTGATATCCAAGGATATGGTTAATTTG
GAGGAAGAAATAGAAGATGGCGAGATAAAAAGTCTTGTAAGGGGAATAGTGGAAGTGCTCTCTGCTCCAAATATATCTGATTTATATCCTGTTTT
AGGAGTTACTCTTAGCTGGTTCAGACACCACTACCTCAACAATTGAGTGGGCGATGGCAGAACTGATAAAGAACGTAGAGTCAATGAAGAAAGTT
CAAGAGGAGCTTGAGATAGAACTCAGTGAAAGTGATTACCTAAAAGAATCTCAATTGCTGCAGATGTCCTATATCCAAGCCTGTGTAAAGGAAAC
ACT
TGCAGAGCCGAGCTTTTCGCTGGAAAAGTATTGGAGTCTCAAGCTTGTCTGAGGGAGAAAAAAAGTGATGGAATTGGTAGAATTCTTGAGGTCAA
AAGAAGGTCAAGTGGTGAATATTGGAGAGCTAGTCTTTGCAACTGTGATGAACATGCTGGGTAATGTTCTGATATCCAAGGATATGGTTAATTTG
GAGGAAGAAATAGAAGATGGCGAGATAAAAAGTCTTGTAAGGGGAATAGTGGAAGTGCTCTCTGCTCCAAATATATCTGATTTATATCCTGTTTT
AGGAGTTACTCTTAGCTGGTTCAGACACCACTACCTCAACAATTGAGTGGGCGATGGCAGAACTGATAAAGAACGTAGAGTCAATGAAGAAAGTT
CAAGAGGAGCTTGAGATAGAACTCAGTGAAAGTGATTACCTAAAAGAATCTCAATTGCTGCAGATGTCCTATATCCAAGCCTGTGTAAAGGAAAC
ACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E254420] | SGN-U569640 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T68496 [Download][View] | Facility Assigned ID: TBFEC30TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |
Working
