EST details — SGN-C33629
| Search information |
| Request: 33629 | Match: SGN-C33629 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C33629 | Clone name: cLEG-27-I8 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180474 is on microarray TOM1: SGN-S1-1-1.4.19.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180474 [TUS-34-H8] | Trace: SGN-T187317 | EST: SGN-E375549 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E254265 | Length: 697 bp (914 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E254265 [] (trimmed)
GTGAGCTTAAACCTTTTCTACACAGGACAGCAAGTACTTGGACCTACAAGCTTGCTCCAACAGACAGGAGAGGCGCACAAGAGACTCCGAAGACT
AATTGCTGAACCACTTTCTGTTGATGGTTTAAAGAAGTATTTTCAGTTTATCAACAGTTTAGCTATTGAAACATTGGATCAGTGGTCTGGAAGAA
AAATTTTGGTTCTTGAAGAAACTTCCACATTTACACTGAAGGTGATAGGCAACATGATAATGAGTTTAGAGCCAACTGGTGAGGAGCAAGAGAAA
TTTCGAACCAATTTCAAGATTATTTCTGGCTCTTTTGCTTCTTTACCCTTTAAAGTCCCGGGAACTGCCTTTTATCGTGGCATTCAGGCTCGTGA
TCGAATGTATGCTATGTTAGACTCGATAATTGACCAACGGAGGAGTGGGGAAAACATAAAACAAGATTTCTTGCAATCCCTGGTGAAGAAGCATG
GCAAAGATGCACCCGAAGGAGATGATGATGACAAACTCACAGATAAACAACTTAAGGATAACATATTGACGCTTCTAGTTGCAGGCCACGATACT
ACAACTGCCGCTTTAACATGGCTCCTCAAATTTCTTCAAGAAAATCCTGCTGAGGAGCATAGAGAAATCCAAGCTCAAAAACAGGCACGTTAGAT
CTCACCTGGTCTGAAGTCAACAATATGCCTTA
AATTGCTGAACCACTTTCTGTTGATGGTTTAAAGAAGTATTTTCAGTTTATCAACAGTTTAGCTATTGAAACATTGGATCAGTGGTCTGGAAGAA
AAATTTTGGTTCTTGAAGAAACTTCCACATTTACACTGAAGGTGATAGGCAACATGATAATGAGTTTAGAGCCAACTGGTGAGGAGCAAGAGAAA
TTTCGAACCAATTTCAAGATTATTTCTGGCTCTTTTGCTTCTTTACCCTTTAAAGTCCCGGGAACTGCCTTTTATCGTGGCATTCAGGCTCGTGA
TCGAATGTATGCTATGTTAGACTCGATAATTGACCAACGGAGGAGTGGGGAAAACATAAAACAAGATTTCTTGCAATCCCTGGTGAAGAAGCATG
GCAAAGATGCACCCGAAGGAGATGATGATGACAAACTCACAGATAAACAACTTAAGGATAACATATTGACGCTTCTAGTTGCAGGCCACGATACT
ACAACTGCCGCTTTAACATGGCTCCTCAAATTTCTTCAAGAAAATCCTGCTGAGGAGCATAGAGAAATCCAAGCTCAAAAACAGGCACGTTAGAT
CTCACCTGGTCTGAAGTCAACAATATGCCTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E254265] | SGN-U568695 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T68341 [Download][View] | Facility Assigned ID: TBFEB52TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0068 | Quality Trim Threshold: 14.5 |
Working
