EST details — SGN-C34173
| Search information |
| Request: 34173 | Match: SGN-C34173 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34173 | Clone name: cLEG-30-A1 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183491 is on microarray TOM1: SGN-S1-1-8.2.2.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183491 [TUS-42-F1] | Trace: SGN-T196192 | EST: SGN-E394866 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255274 | Length: 559 bp (871 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E255274 [] (trimmed)
TTCTGATACATGGAGGCTCTAGTGGAATTGGTACGTTTGCCATTCAAATGGCTAAGTGCCTTGGAGTCAAAGTTTTCATCACAGCAGGAAGTGAG
GAAAAACTTTCCGCATGCAAAGAACTCGGGGCTGATGTTTGCATCAATTACAAGACTGAAGACTTTGTTACACGCATCAAGGAAGAAACAGGAGG
GAAAGGTGTTGATGTCATACTAGATAATATAGGAGGTTCATACTTCCAACGGAACCTTGACAGCCTCAATGTTGATGGTAGGCTCTTCATTATTG
GTTTTATGGGAGGAACAGTGACACAAGTAAATCTTGGCTGTTTGTTAGCAAGACGCCTTACAGTGCAGGCTGCTGGCTTGCGTAGTAGAAGCCCA
AAAAACAAAGCTCAAATTGTGAGAGAAGTGGAAAAAAATGTTTGGCCTGCAATTGCAGCAGGGAAGGTGAAACCGGTGGTGTACAAGTACTTCCC
CTTAGCAGAAGCTGCTGAGGCTCACCAGTTAATGGAAAGCAGCAACCACATTGGAAAGATTCTGCTCACTGTTTGAATGTTGTA
GAAAAACTTTCCGCATGCAAAGAACTCGGGGCTGATGTTTGCATCAATTACAAGACTGAAGACTTTGTTACACGCATCAAGGAAGAAACAGGAGG
GAAAGGTGTTGATGTCATACTAGATAATATAGGAGGTTCATACTTCCAACGGAACCTTGACAGCCTCAATGTTGATGGTAGGCTCTTCATTATTG
GTTTTATGGGAGGAACAGTGACACAAGTAAATCTTGGCTGTTTGTTAGCAAGACGCCTTACAGTGCAGGCTGCTGGCTTGCGTAGTAGAAGCCCA
AAAAACAAAGCTCAAATTGTGAGAGAAGTGGAAAAAAATGTTTGGCCTGCAATTGCAGCAGGGAAGGTGAAACCGGTGGTGTACAAGTACTTCCC
CTTAGCAGAAGCTGCTGAGGCTCACCAGTTAATGGAAAGCAGCAACCACATTGGAAAGATTCTGCTCACTGTTTGAATGTTGTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255274] | SGN-U579777 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69000 [Download][View] | Facility Assigned ID: TBFEM01THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0062 | Quality Trim Threshold: 12.5 |


