EST details — SGN-C34181
| Search information |
| Request: 34181 | Match: SGN-C34181 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34181 | Clone name: cLEG-30-A19 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183499 is on microarray TOM1: SGN-S1-1-8.2.1.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183499 [TUS-42-F9] | Trace: SGN-T196075 | EST: SGN-E394749 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183499 [TUS-42-F9] | Trace: SGN-T196076 | EST: SGN-E394750 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183499 [TUS-42-F9] | Trace: SGN-T200350 | EST: SGN-E399361 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255437 | Length: 562 bp (875 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255437 [] (trimmed)
TTTAAACAAATTTGATAACATATTTGAGTTTTTTTCTTATGGTTAAATGATGCAAGTGCTTCATCACTTTCATAAAGCATTTGAACAATATTATA
TATTTGTGCAGAAGAGAGCTACTTCCTAATGGATATTATATGCATCAAAAGATTCACATTACTCGATTTTCAAAGCAGCAAGAATGTATCGAATG
GAGCTACAAACTATCAACACTTTAGTTAATGGGGAAATTGATTATGAAGATTTACAATCAAAGTTACTTGTCAACAAGAACAAACCAGCTATCAT
CAATATCAATATTGGAACAACCTTCAAAGGAGCTATTGATGACCTCGATTTCGTCATACAAACACTTGAAAATTGTGGTTATTCAAATGACAATT
ATTATATCCATTGCGATGCAGCATTATGTGGGCTAATTCTCCCATTTATCAAACATGCAAAAAAAATTACCTTCAAGAAACCAATTGGAAGTATT
TCAATTTCAGGGCACAAATTCTTGGGATGTCCAATGTCTTGTGGCGTTCAGATAACAAGGAGAAGTTACGTTAGCACCCTCTCAAAA
TATTTGTGCAGAAGAGAGCTACTTCCTAATGGATATTATATGCATCAAAAGATTCACATTACTCGATTTTCAAAGCAGCAAGAATGTATCGAATG
GAGCTACAAACTATCAACACTTTAGTTAATGGGGAAATTGATTATGAAGATTTACAATCAAAGTTACTTGTCAACAAGAACAAACCAGCTATCAT
CAATATCAATATTGGAACAACCTTCAAAGGAGCTATTGATGACCTCGATTTCGTCATACAAACACTTGAAAATTGTGGTTATTCAAATGACAATT
ATTATATCCATTGCGATGCAGCATTATGTGGGCTAATTCTCCCATTTATCAAACATGCAAAAAAAATTACCTTCAAGAAACCAATTGGAAGTATT
TCAATTTCAGGGCACAAATTCTTGGGATGTCCAATGTCTTGTGGCGTTCAGATAACAAGGAGAAGTTACGTTAGCACCCTCTCAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255437] | SGN-U580826 | Tomato 200607 | Build 2 | 46 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69163 [Download][View] | Facility Assigned ID: TBFEM10THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.942 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 14.5 |
Working
