EST details — SGN-C34201
| Search information |
| Request: 34201 | Match: SGN-C34201 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34201 | Clone name: cLEG-30-B3 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177155 is on microarray TOM1: SGN-S1-1-8.2.8.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177155 [TUS-25-N1] | Trace: SGN-T181926 | EST: SGN-E368973 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255358 | Length: 371 bp (849 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E255358 [] (trimmed)
AAATGATAATTCTCGCGCGGTTCGTTACAGCATCAACCATGGTTCTCAAGACAGAACTTTGCCGTTTCAGTGGTGCCAAGATTTACCCTGGGAGA
GGCATCAGATTTATCCGGTCAGACTCTCAGGTGTTCCTATTCGTCAACTCAAAATGTAAACACTACTTCCACAACAAGTTGAAGCCATCCAAGCT
TACATGGACAGCTATGTGTAGGAAGCAACACAAGAAGGATATTGCACAAGAAGCTGCTAAGAAGAGGCGACGTACCACCAAGAAGCCTTACTCTA
GGTCTATTGTGGGTGCAACCTTGGAGGTAATCCAGAAGAAGAGAACTGAAAGGCCAGAAGTTCGAGATGCTGCCAGGGAGGCTGCT
GGCATCAGATTTATCCGGTCAGACTCTCAGGTGTTCCTATTCGTCAACTCAAAATGTAAACACTACTTCCACAACAAGTTGAAGCCATCCAAGCT
TACATGGACAGCTATGTGTAGGAAGCAACACAAGAAGGATATTGCACAAGAAGCTGCTAAGAAGAGGCGACGTACCACCAAGAAGCCTTACTCTA
GGTCTATTGTGGGTGCAACCTTGGAGGTAATCCAGAAGAAGAGAACTGAAAGGCCAGAAGTTCGAGATGCTGCCAGGGAGGCTGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255358] | SGN-U580929 | Tomato 200607 | Build 2 | 85 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69084 [Download][View] | Facility Assigned ID: TBFEO02TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0295 | Quality Trim Threshold: 14.5 |
Working
