EST details — SGN-C34205
| Search information |
| Request: 34205 | Match: SGN-C34205 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34205 | Clone name: cLEG-30-C1 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183503 is on microarray TOM1: SGN-S1-1-4.2.1.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183503 [TUS-42-F13] | Trace: SGN-T200352 | EST: SGN-E399364 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183503 [TUS-42-F13] | Trace: SGN-T200471 | EST: SGN-E399592 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255279 | Length: 562 bp (876 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255279 [] (trimmed)
AACTTGTTCCTCTCCCGCCGGCTATCCAGTTGATATAGCAAGTTTTGATTGATGGGTGTGATTGAATTATGCAACATTTCATCTATTAGCATTGT
TAGAGCAAAACCCAGTTCTTTAAACGAAGGGAATCGGAGGAGGAGAATTGCTTGTATGGCCTCTTCAGTGTCAGTGCAAGAAGAGGAGAGCCATC
AGCAGAAACAAGGTGTAAATGGGGGTTCTTTTATTCGGACCCATCTTCTTAAATTGTCCCCTTACCAACCCATTTTGCCATTTGAGGTCTTGTCC
ACTCGTCTTGGTAGAAAGCCTGAGGACATTGTGAAATTAGACGCTAACGAAAACCCCTATGGACCTCCTCCAGAGGTAAACGAAGCTTTGGGGTC
TATGAAATTTCCATACATTTATCCTGATCCTGAAAGCCGCACGCTGCGTGCAGCTCTTGCTGAAGATTCTGGCCTTGAATCTGAGTATATTCTTG
CAGGGTGCGGTGCAGATGAACTCATTGATTTGATAATGAGATGCATATTGGATCCTGGTGACAAGATTGTTGACTGCCCACCCACTT
TAGAGCAAAACCCAGTTCTTTAAACGAAGGGAATCGGAGGAGGAGAATTGCTTGTATGGCCTCTTCAGTGTCAGTGCAAGAAGAGGAGAGCCATC
AGCAGAAACAAGGTGTAAATGGGGGTTCTTTTATTCGGACCCATCTTCTTAAATTGTCCCCTTACCAACCCATTTTGCCATTTGAGGTCTTGTCC
ACTCGTCTTGGTAGAAAGCCTGAGGACATTGTGAAATTAGACGCTAACGAAAACCCCTATGGACCTCCTCCAGAGGTAAACGAAGCTTTGGGGTC
TATGAAATTTCCATACATTTATCCTGATCCTGAAAGCCGCACGCTGCGTGCAGCTCTTGCTGAAGATTCTGGCCTTGAATCTGAGTATATTCTTG
CAGGGTGCGGTGCAGATGAACTCATTGATTTGATAATGAGATGCATATTGGATCCTGGTGACAAGATTGTTGACTGCCCACCCACTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255279] | SGN-U574459 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69005 [Download][View] | Facility Assigned ID: TBFEM13THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.984 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |
Working
