EST details — SGN-C34331
| Search information |
| Request: 34331 | Match: SGN-C34331 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34331 | Clone name: cLEG-30-I5 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183549 is on microarray TOM1: SGN-S1-1-6.4.1.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183549 [TUS-42-H11] | Trace: SGN-T196086 | EST: SGN-E394760 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183549 [TUS-42-H11] | Trace: SGN-T196198 | EST: SGN-E394872 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183549 [TUS-42-H11] | Trace: SGN-T196198 | EST: SGN-E399378 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183549 [TUS-42-H11] | Trace: SGN-T200360 | EST: SGN-E399379 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255301 | Length: 548 bp (870 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255301 [] (trimmed)
CAAGCAACTCCTTTAAGCATCGGCATTCAGGCTGATGGAGGTGACTTTGTACCAGTTATTCATCAGAACACCACAACACCGGTAAGGAAAGAACA
GATCTTCACTACCGTCCATGATGACCAAGCTGAAGCATTGATCCTGGTTTACGAAGGCGATGAGAAAGCCGCGGAACACAATCATCTCCTAGGCT
ATTTTAAGATCAGAGGAATACCTCCAGCACAAAAAGGTGTTCCTGAGATTAGTGTGTGCATGGACATTGATGCTTCTAATGTCCTGAGAGTCTTT
GCTGGCGTAATCGTGCACGGGACTCAGCGTGCTCCTATGCCTTTCATGGAAGTAAGGATGCCTACTGTTGATGATGGACATGGCTGGTCTGCTCA
AGCTCTGCATAAAATGTATGGATCCACTTTAGATTTGGTTACAGTAAAGAAAATACAGCATCGAGATTGCTGAATACATAATAAAGTTATAAGAG
ACATATTAGGTGTTGTTAGTAGTGAAAAATGTGGCAACTATTTCATGTAAATATGTGTCCTGTTTTATATTTG
GATCTTCACTACCGTCCATGATGACCAAGCTGAAGCATTGATCCTGGTTTACGAAGGCGATGAGAAAGCCGCGGAACACAATCATCTCCTAGGCT
ATTTTAAGATCAGAGGAATACCTCCAGCACAAAAAGGTGTTCCTGAGATTAGTGTGTGCATGGACATTGATGCTTCTAATGTCCTGAGAGTCTTT
GCTGGCGTAATCGTGCACGGGACTCAGCGTGCTCCTATGCCTTTCATGGAAGTAAGGATGCCTACTGTTGATGATGGACATGGCTGGTCTGCTCA
AGCTCTGCATAAAATGTATGGATCCACTTTAGATTTGGTTACAGTAAAGAAAATACAGCATCGAGATTGCTGAATACATAATAAAGTTATAAGAG
ACATATTAGGTGTTGTTAGTAGTGAAAAATGTGGCAACTATTTCATGTAAATATGTGTCCTGTTTTATATTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255301] | SGN-U580434 | Tomato 200607 | Build 2 | 35 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69027 [Download][View] | Facility Assigned ID: TBFEM51THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 12.5 |
Working
