EST details — SGN-C34342
| Search information |
| Request: 34342 | Match: SGN-C34342 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34342 | Clone name: cLEG-30-J18 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180678 is on microarray TOM1: SGN-S1-1-5.4.19.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180678 [TUS-34-P20] | Trace: SGN-T187281 | EST: SGN-E375513 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180678 [TUS-34-P20] | Trace: SGN-T187282 | EST: SGN-E375514 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255419 | Length: 582 bp (880 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255419 [] (trimmed)
AAAAAGAAGGTTAAAACGCAAAGCAACTTAATTCATTTGTTATAAATTGGAGGAGCCAAAGATAGTGAGATTCACAAAACTTTATATCTCTAAGA
ATGGAAATTCAAAAGGAGTTTGATTTAACGATAGTTCCAACAGAAGGTGAAATTGATGCACCATCATCGCCAAGGAAGAATTTATGTCTCAGTGT
GATGGAATCTGATATTAAAAATGAAACGTCTTTTCAAGAACTCGACATGATTTTGACTCAATATTTAGAGACATTGTCCGAGCGAAAAAAGTATC
ATATAGGTTATCCAATTAACATGTGTTACGAACATCATGCCACTTTAGCCCCACTTTTGCAATTTCATTTGAACAATTGTGGAGATCCCTTTACT
CAGCACCCTACAGATTTCCATTCAAAAGATTTTGAAGTGGCTGTTTTAGATTGGTTTGCACAACTCTGGGAAATAGAGAAAGATGAATATTGGGG
ATACATTACTAGTGGTGGCACTGAGGGCAATCTCCATGGCCTTTTGGTTGGGCAGAAGAGAGCTACTTCCTAATGGATATTATATGCATCAAAAG
ATTCACATTACT
ATGGAAATTCAAAAGGAGTTTGATTTAACGATAGTTCCAACAGAAGGTGAAATTGATGCACCATCATCGCCAAGGAAGAATTTATGTCTCAGTGT
GATGGAATCTGATATTAAAAATGAAACGTCTTTTCAAGAACTCGACATGATTTTGACTCAATATTTAGAGACATTGTCCGAGCGAAAAAAGTATC
ATATAGGTTATCCAATTAACATGTGTTACGAACATCATGCCACTTTAGCCCCACTTTTGCAATTTCATTTGAACAATTGTGGAGATCCCTTTACT
CAGCACCCTACAGATTTCCATTCAAAAGATTTTGAAGTGGCTGTTTTAGATTGGTTTGCACAACTCTGGGAAATAGAGAAAGATGAATATTGGGG
ATACATTACTAGTGGTGGCACTGAGGGCAATCTCCATGGCCTTTTGGTTGGGCAGAAGAGAGCTACTTCCTAATGGATATTATATGCATCAAAAG
ATTCACATTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255419] | SGN-U578845 | Tomato 200607 | Build 2 | 253 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69145 [Download][View] | Facility Assigned ID: TBFEP57TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.952 | Expected Error Rate: 0.0082 | Quality Trim Threshold: 14.5 |
Working
