EST details — SGN-C34399
| Search information |
| Request: 34399 | Match: SGN-C34399 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34399 | Clone name: cLEG-30-M17 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183587 is on microarray TOM1: SGN-S1-1-8.2.2.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183587 [TUS-42-J1] | Trace: SGN-T199666 | EST: SGN-E398340 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183587 [TUS-42-J1] | Trace: SGN-T199666 | EST: SGN-E399391 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183587 [TUS-42-J1] | Trace: SGN-T200367 | EST: SGN-E399390 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255460 | Length: 558 bp (878 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255460 [] (trimmed)
AAAAAGGGAAGATTCCAAAAACACAAGGAAGAGGACAATCAAATTGAATAGCGTATTTTGTAAGCATTTCGAGGGTTACGTACCACAAATCTACA
ATTCTTTCTCCTATAAATATAAAAATTAAAAATAGGGGAGAGGAAGAGAAAGGTGTGCTGTATCAATGGAAGAAGCTAATAATAACACAGAATCT
CCCTACATTTCTTCTATCTTACCTGGATGGTTCTCTGAGATTAGCCCACTTTGGCCTGGGGAAGCACACTCATTGAAGGTTGAAAAGATATTATT
TCAGGGGAAGTCAGATTACCAAAATGTCATGGTTTTTCAGTCATCAACTTACGGAAAAGTGCTTAGTTTGGATGGTGTTATACAACTCACAGAGC
GGGATGAATGTGCTTACCAAGAAATGATCACTCATCTCCCACTTTGCTCAATTCCAAACCCCAGAAAGGTGTTGGTTATTGGAGGAGGTGATGGT
GGTGTCTTGCGTGAGGTGTCTCGGCATTCTTCTGTTGAACAGATAGACATATGTGAGATTGACAAGATGGTAATTGATGTCTC
ATTCTTTCTCCTATAAATATAAAAATTAAAAATAGGGGAGAGGAAGAGAAAGGTGTGCTGTATCAATGGAAGAAGCTAATAATAACACAGAATCT
CCCTACATTTCTTCTATCTTACCTGGATGGTTCTCTGAGATTAGCCCACTTTGGCCTGGGGAAGCACACTCATTGAAGGTTGAAAAGATATTATT
TCAGGGGAAGTCAGATTACCAAAATGTCATGGTTTTTCAGTCATCAACTTACGGAAAAGTGCTTAGTTTGGATGGTGTTATACAACTCACAGAGC
GGGATGAATGTGCTTACCAAGAAATGATCACTCATCTCCCACTTTGCTCAATTCCAAACCCCAGAAAGGTGTTGGTTATTGGAGGAGGTGATGGT
GGTGTCTTGCGTGAGGTGTCTCGGCATTCTTCTGTTGAACAGATAGACATATGTGAGATTGACAAGATGGTAATTGATGTCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255460] | SGN-U580117 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69186 [Download][View] | Facility Assigned ID: TBFEM81THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0080 | Quality Trim Threshold: 14.5 |
Working
