EST details — SGN-C34463
| Search information |
| Request: 34463 | Match: SGN-C34463 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34463 | Clone name: cLEG-30-P20 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177283 is on microarray TOM1: SGN-S1-1-8.3.7.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177283 [TUS-26-C9] | Trace: SGN-T182189 | EST: SGN-E368779 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177283 [TUS-26-C9] | Trace: SGN-T182190 | EST: SGN-E368780 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255570 | Length: 572 bp (898 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255570 [] (trimmed)
AATTCTCAATATCTCACTGAATTTGTCACTGATCCCAAGAATCTTCGGCGACCGACGAAGCACCATCGTGTTCGATCCATTTTCAATTGACGTAT
TTGATCCATTCAAGGAATTAGGCTTCACAGTTTCAAATTCAGGGGAGACCTCTGCATTTGCCAACACTCGAATCGACTGGAAGGAAACTCCAGAA
GCTCATGTGTTCAAGGCTGATCTTCCAGGGCTTAAGAAGGAGGAAGTCAAAGTGGAGATCGAAGAGGATCGTGTTCTTCAGATCAGCGGAGAGAG
GAACGTGGAGAAAGAAGACAAGAACGATACTTGGCACCGTGTGGAACGCAGCAGCGGGAAATTCATGAGAAGATTTAGACTTCCGGAGAATGCAA
AGATGGATCAAATTAAGGCGTCTATGGAGAATGGAGTGCTTACTGTTACTGTTCCGAAGGAGGAGGTGAAGAAGCCTGATGTCAAGTCCATTGAG
ATCTCTGGTTAAAATATGTGAATTTATTGTATCCTTGTATGGGCAAATAAAAAATAATCGTATCTGTAGTGTTTGAAGTCGTTCTGTTTCTGTAT
TA
TTGATCCATTCAAGGAATTAGGCTTCACAGTTTCAAATTCAGGGGAGACCTCTGCATTTGCCAACACTCGAATCGACTGGAAGGAAACTCCAGAA
GCTCATGTGTTCAAGGCTGATCTTCCAGGGCTTAAGAAGGAGGAAGTCAAAGTGGAGATCGAAGAGGATCGTGTTCTTCAGATCAGCGGAGAGAG
GAACGTGGAGAAAGAAGACAAGAACGATACTTGGCACCGTGTGGAACGCAGCAGCGGGAAATTCATGAGAAGATTTAGACTTCCGGAGAATGCAA
AGATGGATCAAATTAAGGCGTCTATGGAGAATGGAGTGCTTACTGTTACTGTTCCGAAGGAGGAGGTGAAGAAGCCTGATGTCAAGTCCATTGAG
ATCTCTGGTTAAAATATGTGAATTTATTGTATCCTTGTATGGGCAAATAAAAAATAATCGTATCTGTAGTGTTTGAAGTCGTTCTGTTTCTGTAT
TA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255570] | SGN-U578203 | Tomato 200607 | Build 2 | 63 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69296 [Download][View] | Facility Assigned ID: TBFEP94TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0223 | Quality Trim Threshold: 12.5 |
Working
