EST details — SGN-C35296
| Search information |
| Request: 35296 | Match: SGN-C35296 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C35296 | Clone name: cLEG-34-F19 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180827 is on microarray TOM1: SGN-S1-1-8.3.17.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180827 [TUS-35-G1] | Trace: SGN-T187394 | EST: SGN-E375626 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180827 [TUS-35-G1] | Trace: SGN-T187395 | EST: SGN-E375627 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E254195 | Length: 546 bp (861 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E254195 [] (trimmed)
GAAGATCTAATGGTGGCAAATATAACTTTCTGGAGCGGCTTTTAGGGGTTGCGCATCTGTTGTCACAGATGGTTGAGCCAGTTTTAAGGGCCGCG
TCGGAGATATCCACACTTCTTGCACGATCATTTTTTATGGGATTTTCGCTGACAGTATTGTCCTTGCTTGCCCGAATAAGAGTTCTAGTTCAGCA
AATTCTTCTAGATGTTGTTTGTGTATTCAACAATGTTTCCTCTTTATCACAGAGGGAACAAGCCATCAAATTGACTCAAGATGGTTTTGAGGTTT
TTAGAGAATATTTTCCGCCAAAGCAGCAGGTGGTCTTCCTCGAATGTATTTGGGAATCTGATAAGTATATGTTAGTTGAGAGACAAAATCAGAAA
GATGTTGGAAGCCAGGAAAAGGATGTTGGAGAAGATGTTTCTGTAGAAGCATCTAAGGTTCAGTATGAAAGCATTGGGCTTTTCCTAGGAGATGA
TGAACCTGGACAGACGGCCTCTAAAGATTCAGCTGAGGATGGTCAAACTATGAAGGACAACGATATAGTAG
TCGGAGATATCCACACTTCTTGCACGATCATTTTTTATGGGATTTTCGCTGACAGTATTGTCCTTGCTTGCCCGAATAAGAGTTCTAGTTCAGCA
AATTCTTCTAGATGTTGTTTGTGTATTCAACAATGTTTCCTCTTTATCACAGAGGGAACAAGCCATCAAATTGACTCAAGATGGTTTTGAGGTTT
TTAGAGAATATTTTCCGCCAAAGCAGCAGGTGGTCTTCCTCGAATGTATTTGGGAATCTGATAAGTATATGTTAGTTGAGAGACAAAATCAGAAA
GATGTTGGAAGCCAGGAAAAGGATGTTGGAGAAGATGTTTCTGTAGAAGCATCTAAGGTTCAGTATGAAAGCATTGGGCTTTTCCTAGGAGATGA
TGAACCTGGACAGACGGCCTCTAAAGATTCAGCTGAGGATGGTCAAACTATGAAGGACAACGATATAGTAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E254195] | SGN-U564639 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T70253 [Download][View] | Facility Assigned ID: TBFFE34TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |
Working
