EST details — SGN-E355736
| Search information |
| Request: 355736 | Match: SGN-E355736 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C101385 | Clone name: cLHT-18-H9 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193846 [TUS-69-E12] | Trace: SGN-T346967 | EST: SGN-E546092 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193846 [TUS-69-E12] | Trace: SGN-T346968 | EST: SGN-E546093 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E355736 | Length: 560 bp (818 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E355736 [] (trimmed)
TCAATCTTTCACCTTCCACTGGGCAATTTTCTTGAACAAACTGAATATTCTGAACAAGAAAAACTCCATCAATGAATCCAGAAAGCTCCAATAAC
AACAGCCAAACAAACCCTAGAAAAAGACCATTAGTAGAAGAACCTAACAATGACAAACAACCAATAACACTAAATTCCATGGTGGTAGCCATTGA
TCACAACAATCTCTTTTACACAGTTTGTTCTATATGTGAAAAGACTCTACCTGACCCTTCTCCAAATACCCATATCCCCAATTCTTCTTCATCAT
CATCTTCAATACCCTTTTGCAGAAATTGCAACTTCAACTCTGCTTCTTCTGGTTCCAAACGCCTCTTTCGTGTTCTTATGTCTATAGCTACTGAG
AAAAGAGTGGTTGTGGTGATAATGTTTGATAGGGCAGCTAGGGTTTTATTTGGTTGTACTGCTGATGAGTTCTTTGATTTTGCCAAGACTCACCC
TTTTGCTGCTGCAGCTGCCGGTAATGCTTTGGAGGGAGAGATGTTGAAGATCACCTTGTTCAAACCAAAGAATGGAAATGCACGA
AACAGCCAAACAAACCCTAGAAAAAGACCATTAGTAGAAGAACCTAACAATGACAAACAACCAATAACACTAAATTCCATGGTGGTAGCCATTGA
TCACAACAATCTCTTTTACACAGTTTGTTCTATATGTGAAAAGACTCTACCTGACCCTTCTCCAAATACCCATATCCCCAATTCTTCTTCATCAT
CATCTTCAATACCCTTTTGCAGAAATTGCAACTTCAACTCTGCTTCTTCTGGTTCCAAACGCCTCTTTCGTGTTCTTATGTCTATAGCTACTGAG
AAAAGAGTGGTTGTGGTGATAATGTTTGATAGGGCAGCTAGGGTTTTATTTGGTTGTACTGCTGATGAGTTCTTTGATTTTGCCAAGACTCACCC
TTTTGCTGCTGCAGCTGCCGGTAATGCTTTGGAGGGAGAGATGTTGAAGATCACCTTGTTCAAACCAAAGAATGGAAATGCACGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E355736] | SGN-U571683 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T170578 [Download][View] | Facility Assigned ID: THTCS41TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.949 | Expected Error Rate: 0.0141 | Quality Trim Threshold: 14.5 |
Working
