EST details — SGN-E357214
| Search information |
| Request: 357214 | Match: SGN-E357214 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C101289 | Clone name: cLHT-17-H3 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193829 [TUS-69-D19] | Trace: SGN-T346938 | EST: SGN-E546063 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193829 [TUS-69-D19] | Trace: SGN-T346939 | EST: SGN-E546064 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E357214 | Length: 541 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E357214 [] (trimmed)
AAAAGAAAATATGGAGGTAATGGATATTCTATTACTTGGCTTAACAATTCTTTTTTTATTTATATGGTGGAAATATTGGTCAATCACCGGTGGTG
GAAAGAAAAATTTGCCACCGGGTCCTCCTGGTTGGCCATTGGTTGGAAATCTTTTCCAAGTTATTCTCCAACGTCGTCCATTTATTTACGTAGTA
CGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGACAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGC
ATTAGTTCAAAACGGTCCGCTTTTCGCGAGCCGTCCACCGGATTCACCGATCCGTTTGATATTTTCCGTGGGAAAGTGCGCCATCAACTCGGCCG
AGTATGGCCCGTTGTGGCGCGCACTCCGACGGAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGCTGGATAACGAAATGG
GCTATGGAATATCATATGAAAAGGCTTGAGTATGAGGTTTCTGAGAATGGGTTTGTGGAAGTGATG
GAAAGAAAAATTTGCCACCGGGTCCTCCTGGTTGGCCATTGGTTGGAAATCTTTTCCAAGTTATTCTCCAACGTCGTCCATTTATTTACGTAGTA
CGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGACAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGC
ATTAGTTCAAAACGGTCCGCTTTTCGCGAGCCGTCCACCGGATTCACCGATCCGTTTGATATTTTCCGTGGGAAAGTGCGCCATCAACTCGGCCG
AGTATGGCCCGTTGTGGCGCGCACTCCGACGGAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGCTGGATAACGAAATGG
GCTATGGAATATCATATGAAAAGGCTTGAGTATGAGGTTTCTGAGAATGGGTTTGTGGAAGTGATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E357214] | SGN-U577985 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T170879 [Download][View] | Facility Assigned ID: THTCO38TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0100 | Quality Trim Threshold: 14.5 |


