EST details — SGN-E362374
| Search information |
| Request: 362374 | Match: SGN-E362374 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C103455 | Clone name: cLPP-10-N17 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194549 [TUS-71-B19] | Trace: SGN-T348175 | EST: SGN-E547300 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C194549 [TUS-71-B19] | Trace: SGN-T350388 | EST: SGN-E549513 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E362374 | Length: 377 bp (836 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E362374 [] (trimmed)
GAGCTCTCCCTCTCTATATTTTTTTCATTTTTCCCCCCTATAAATTTTATCCAAAAATAAAAAATTAAAAAATTAAAAGGAAAAAAATCATCTAT
TTTATGTTTTGTTTCCTACTTGTTATCTAACTTTTTTTTATTTGTTTGTTCATAACATATTGTACCTAAAAGATTATTATTGAGGTTGTAACAAA
ATGGGGAAATTTGTAAAAATACCCTTTATAGGATTTATGTTATTTTGTGTCTTAGCTATGGTTATAGAGGCAGAAAATATGAAATATAAAGATCC
AAAACAAAAATTGAGTGTTAGAATTAAAGATTTATTGAAAAGAATGACACTTGAAGAAAAAATTGGTCAAATGACTCAAATTGAGAGGAAAG
TTTATGTTTTGTTTCCTACTTGTTATCTAACTTTTTTTTATTTGTTTGTTCATAACATATTGTACCTAAAAGATTATTATTGAGGTTGTAACAAA
ATGGGGAAATTTGTAAAAATACCCTTTATAGGATTTATGTTATTTTGTGTCTTAGCTATGGTTATAGAGGCAGAAAATATGAAATATAAAGATCC
AAAACAAAAATTGAGTGTTAGAATTAAAGATTTATTGAAAAGAATGACACTTGAAGAAAAAATTGGTCAAATGACTCAAATTGAGAGGAAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E362374] | SGN-U582066 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T176130 [Download][View] | Facility Assigned ID: TPOBM81TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.875 | Expected Error Rate: 0.0036 | Quality Trim Threshold: 14.5 |


