EST details — SGN-E362517
| Search information |
| Request: 362517 | Match: SGN-E362517 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C105967 | Clone name: cLPP-1-G3 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C194225 [TUS-70-E7] | Trace: SGN-T347618 | EST: SGN-E546743 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C194225 [TUS-70-E7] | Trace: SGN-T347619 | EST: SGN-E546744 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E362517 | Length: 526 bp (885 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E362517 [] (trimmed)
GGCGATTGCGGCGGCGGTAGCGGCGGCGACCTCTGCTTTCACCTCATTCCACCTCACTCGCGCAACTCCCTACACGCGCCTCCACATTCGTACCT
TCATAACTTCATCACTCTCCTCTTCCTCAACTAAATTCAACATCACTTTTGCTCCACCAAAACCCAAACCCAAACCCAAACCAGAACCCGCAATT
CCCATAAACTCCGACTCCGACTCCGACTCCGACTCCAATTCGGTCCCGAACTTGGAGGCTGAAATCGGTGACCAGCTCTATATACCTTGGATTGT
TCGTGATGAAAAGGGTAATCTCACTCTCCAATCTACACCTCCTGCACGTCTACTCCATGAGATGGCTAATGCTAGCACTAGTAAGAAAAAGAAGA
AGGGAAAAGAGGTTGCTTCCAAAGCTGCCACGGTGGTTCCTACACCTGAGCCTAAGCATTCAAAAGCAGCTCGCCGGTTCTATAATGAGAACTTT
AGAGACCCTCCTCAACGCCTCAATAAAGTCCTTGCTGCTGCTGGAGTGGCA
TCATAACTTCATCACTCTCCTCTTCCTCAACTAAATTCAACATCACTTTTGCTCCACCAAAACCCAAACCCAAACCCAAACCAGAACCCGCAATT
CCCATAAACTCCGACTCCGACTCCGACTCCGACTCCAATTCGGTCCCGAACTTGGAGGCTGAAATCGGTGACCAGCTCTATATACCTTGGATTGT
TCGTGATGAAAAGGGTAATCTCACTCTCCAATCTACACCTCCTGCACGTCTACTCCATGAGATGGCTAATGCTAGCACTAGTAAGAAAAAGAAGA
AGGGAAAAGAGGTTGCTTCCAAAGCTGCCACGGTGGTTCCTACACCTGAGCCTAAGCATTCAAAAGCAGCTCGCCGGTTCTATAATGAGAACTTT
AGAGACCCTCCTCAACGCCTCAATAAAGTCCTTGCTGCTGCTGGAGTGGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E362517] | SGN-U595000 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T174578 [Download][View] | Facility Assigned ID: TPOAA38TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0112 | Quality Trim Threshold: 14.5 |
Working
