EST details — SGN-E362796
| Search information |
| Request: 362796 | Match: SGN-E362796 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C106378 | Clone name: cLPP-2-A18 |
| ||
| Library Name: cLPP | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: pollen
Development Stage: pollen collected from open flowers
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180157 [TUS-33-K3] | Trace: SGN-T186502 | EST: SGN-E374050 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180157 [TUS-33-K3] | Trace: SGN-T186503 | EST: SGN-E374051 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E362796 | Length: 587 bp (906 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E362796 [] (trimmed)
CTGTATTCAAAATTAAATACAAATAAAAGGAGCAAAACGTTCATAGCAAGAAAGAAAAAATGGCACCTAAAATCATTGTTCTTGCTCTCGTTTTC
TTCGCCATGGTTTGTATGGTCTCCGCCATTGATGAATATTCTACAACAACTGCAGCTTTGAAAGACGCAGCTAATGCTCCTATTCCGGTTGAAAA
CAACAACATTATTGGTACGATTAATGGGAGCGATGAAAATGAAGCTGTATCTGCTGCACCAGTTGGTGGACCCGTTTCTGGAGTTACTTTTCCTG
ACATAAGCCTACCACCAGCACCCAATGGAGGCAGCAGTAGCAATACTATTGATTTCACCACAATTGCCACAATTATTGTTGCTGTTTCATTCTTT
TTTTAAATCATGAGTGGAGGGAGCTTCAATCCATGTTTTCTTGGTTACATATTTTCCTGTCTTTAATTTATGTTACATGTTATAATGGACAATAT
GTAAAAGACATCATCTTTGTAAACCATGAAATTTTAATGAAAAAATGAAAAACTTTGAATCGGAAAANAAAAANNNAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
TTCGCCATGGTTTGTATGGTCTCCGCCATTGATGAATATTCTACAACAACTGCAGCTTTGAAAGACGCAGCTAATGCTCCTATTCCGGTTGAAAA
CAACAACATTATTGGTACGATTAATGGGAGCGATGAAAATGAAGCTGTATCTGCTGCACCAGTTGGTGGACCCGTTTCTGGAGTTACTTTTCCTG
ACATAAGCCTACCACCAGCACCCAATGGAGGCAGCAGTAGCAATACTATTGATTTCACCACAATTGCCACAATTATTGTTGCTGTTTCATTCTTT
TTTTAAATCATGAGTGGAGGGAGCTTCAATCCATGTTTTCTTGGTTACATATTTTCCTGTCTTTAATTTATGTTACATGTTATAATGGACAATAT
GTAAAAGACATCATCTTTGTAAACCATGAAATTTTAATGAAAAAATGAAAAACTTTGAATCGGAAAANAAAAANNNAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E362796] | SGN-U567716 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T173656 [Download][View] | Facility Assigned ID: TPOAF09TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0121 | Quality Trim Threshold: 12.5 |
Working
