EST details — SGN-E366177
| Search information |
| Request: 366177 | Match: SGN-E366177 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C109849 | Clone name: cLPT-1-E15 |
| ||
| Library Name: cLPT | Organism: Solanum pennellii (formerly Lycopersicon pennellii) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: Alias clone SGN-C183041 is on microarray TOM1: SGN-S1-1-2.3.3.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C109849 [cLPT-1-E15] | Trace: SGN-T177601 | EST: SGN-E366176 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C183041 [TUS-41-C7] | Trace: SGN-T191469 | EST: SGN-E390143 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183041 [TUS-41-C7] | Trace: SGN-T197471 | EST: SGN-E396145 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E366177 | Length: 560 bp (921 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E366177 [] (trimmed)
TTTTTTTTTATACCAAAAGTAGTCTCCATTTTATTTATTTCAGAAATATAACAACGAGTGCTCTTCCATATTTGATTCATACATACATAATACAT
ACAAACAACATACACACAGTTGATTTTGCGAAGCAAAAGTACTGTCAGGCCAAAAAAAGGAAGGAAATTGTGAGGGCCAAATGGTAATTGAATTA
AGTTCATACGGAAAGAGGAGGAGAAAGACCGAACTCAAGTCCCCACAGCTCAAATCCACCCTTCACGAAATCATAGTAACCTCCCTTCAATGCCA
ATGTTTTCTTCACCAATCCTTCTCTCACGAATGGATACGTAAGCAGATTTCCAAGTGAAACGTTCACAGCTTCCTTCTCACAAGCTGTGCATTGA
TGTGCAAATTCTTTCCCTCCGTGATCGGCCAGAACCTTTGCCTTGGCAGGTAAACAAATTTTCACCCAATCCTCAATAAAGGCAGTTGATTCACT
ACCATCTTCAGGTAGTGACATGAGACCTTTGATACCTCCACAAGCACTGTGGCCAATGACAACGATGTTCTCCACCTTAAGATGA
ACAAACAACATACACACAGTTGATTTTGCGAAGCAAAAGTACTGTCAGGCCAAAAAAAGGAAGGAAATTGTGAGGGCCAAATGGTAATTGAATTA
AGTTCATACGGAAAGAGGAGGAGAAAGACCGAACTCAAGTCCCCACAGCTCAAATCCACCCTTCACGAAATCATAGTAACCTCCCTTCAATGCCA
ATGTTTTCTTCACCAATCCTTCTCTCACGAATGGATACGTAAGCAGATTTCCAAGTGAAACGTTCACAGCTTCCTTCTCACAAGCTGTGCATTGA
TGTGCAAATTCTTTCCCTCCGTGATCGGCCAGAACCTTTGCCTTGGCAGGTAAACAAATTTTCACCCAATCCTCAATAAAGGCAGTTGATTCACT
ACCATCTTCAGGTAGTGACATGAGACCTTTGATACCTCCACAAGCACTGTGGCCAATGACAACGATGTTCTCCACCTTAAGATGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E366177] | SGN-U578484 | Tomato 200607 | Build 2 | 220 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T177602 [Download][View] | Facility Assigned ID: TPTAA32TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |
Working
