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EST details — SGN-E367893

Search information 
Request: 367893Match: SGN-E367893
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175883Clone name: TUS-22-I1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175883 is on microarray TOM1 spot ID 1-1-8.1.11.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175883 [TUS-22-I1] Trace: SGN-T1379 EST: SGN-E378370 Direction: 5' Facility: Giov. Lab
Clone: SGN-C175883 [TUS-22-I1] Trace: SGN-T180508 EST: SGN-E367894 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E367893Length: 726 bp (909 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E367893 [] (trimmed) ATAAATTAAAACTGTAATATAATTATTTGTTCTTAAAAGAAGATAGAATATTGCCCCGTGCGATAAAACTGTGTTCTTGTAGTAAACATTTTCAC
CCAAAAAAGTGAGACTTTGTTAAGAATATGCAGGAAATGGGATCATTACTTAAGAGATTTCGACTTAGTATTAGACGATCCTCCCTGATGGGAAA
ACAAAATTGAAATATCAAAAACTCAACTCTAATGCAAGCACAGATAAATATAGAAAAACATAGCCTCAGGGGGTCCTAAAGCTCCATCTCCAATT
TCTATCTAATGAGACTTCACATACTCTTGGACGATATGGAGACCCTCAGTCTCTTCACCGTAATCCTTCACGACAACACAGCCACAACCAACAAC
CTTCCTTGCTTTACCTTCAGAATCAATCTTACATAAACCAGCCCATTCGCCAAGAGTCTTTGCATTGGGAACTGTAATCAAACTGACGTTGTGAT
CAGCACAAAGTCCTTTCACCAGTTTGACATAATCTGGCTGATCACAGTCCTCTGCTAGCACACAAAGCTGTGCAGCATGCTTCTCAATGACCTTA
GCACCTTCATGAAGTCCTCGAGCAAGCCCTCCATGAGCTTTAGACTTCCTGAGCACCAGCTGCAGAGCAGTCATGATATCCATGGGCTCTCCAAG
TGCTGGAGCAGGAGTCTCGACAGCGGGAACAGCAACAGCAGCATCCTCTCCAGACATTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367893] SGN-U572069 Tomato 200607 Build 2 46 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180507 [Download][View] Facility Assigned ID: FA0AAD10AE01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0046 Quality Trim Threshold: 12.5