EST details — SGN-E367900

Search information 
Request: 367900Match: SGN-E367900
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175937Clone name: TUS-22-K7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175937 is on microarray TOM1 spot ID 1-1-2.3.11.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17430 [cLED-19-K18] Trace: SGN-T53589 EST: SGN-E237675 Direction: 5' Facility: TIGR
Clone: SGN-C175937 [TUS-22-K7] Trace: SGN-T180513 EST: SGN-E367899 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E367900Length: 675 bp (911 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E367900 [] (trimmed) TTATCATACAGTAATCGAAAACTGCTCAAAGTAACTTCTCACATTCTTCTAGAGAGATCTGACCCTTTAGAACAAAATGGAGCATGAAGACAGCT
ACAAGGGAGTTTCGGAGCCAAAATATGAGTGCCTTCTGTTTGATGTTGATGATACACTTTATCCACTTAGCTCTGGTATTTCTGCACAATGCACG
AAAAATATCATTGATTATATGATTGAAAAGCTTGGCATTGATGAGACTAAAGTTCCAGAAATGTGTATAAGCTTATATAAGGAGTACGGAACAAC
CATGGCTGGTCTCAGGGCCATTGGTTACGACTTTGATTATGATGACTATCATAGTTTTGTACATGGGAGATTACCTTATGAACTTTTAAAGCATG
ACCATGTTCTGAGGAATCTTTTGCATAGCTTGCCTGTTCGGAAAGTTATATTTTCAAATGCAAATGAAGCCCATGTGGCAAAAGTTCTTAGCAGG
CTCGGATTAGAGGACTGCTTTGATGATATCGTATGCTTTGAGACTGTGAATCCTACCAACAACGGCAGTGCACAAGACAGCAACAATGGTGTATC
CCCTAGGTCTCTTATTGTTTGCAAACCGTTCAAAGAAGCCTATGAACAAGCCTTTAAAATAGCCAACATTAACCCTCAGAAGACGCTGTTCTTTG
ATGACTCGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367900] SGN-U575764 Tomato 200607 Build 2 29 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180514 [Download][View] Facility Assigned ID: FA0AAD10AF04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5