EST details — SGN-E367902

Search information 
Request: 367902Match: SGN-E367902
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175979Clone name: TUS-22-M1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175979 is on microarray TOM1 spot ID 1-1-8.1.11.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18608 [cLED-24-A22] Trace: SGN-T54651 EST: SGN-E240754 Direction: 5' Facility: TIGR
Clone: SGN-C175979 [TUS-22-M1] Trace: SGN-T180517 EST: SGN-E367903 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E367902Length: 633 bp (890 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E367902 [] (trimmed) AAAAGAGACCAGAATCCATTCTGATTTGGCAAAAATAGGGCAAAGGGGAAGAAGAAGAATTTATGTACGTGATGCCATCATAGAGAATAATCTAC
GCTAGCTGCAAAAAACTTTAGTTGAACATATCAACTGACAAAAAGATCTCAAGCTAACAAACTAAATATAATGTACAATGACATAAAAGGTTTAT
AAACATTTGATTGTGCCATTAACACAACATTTTCTGTACAAGAGGGTGAACACTCTTTCTCCAAAGCTTCTTTATACATATTCTATAGGCATAAA
GACAAGAAGCCAGAACATAGCGATGATTCCACTGGTATCCCACTTACAGATGGCCCAATCTCTCCTGAAGCAGCTGCATCAACTTTGGATGTTGT
TCTAATAGCTGGCAGAGTTTGTCACGGTCACTCAAGAGAGACTGAATAGCTTGTGGAGATCTAAAAAAATCTTGTAATGACATCCCAGAATCTTG
TTGCTGGGTGACAATATCACCTTGCTGCTGTGGTACTTGAGAAAGAGAATGTTCGATTTGTTGCTGTTGTAACGAATTCTCCTGCTGTTGAGTCT
GGTAGTACACATGAGCTGGAGAAACTTGAGGTTGATGCAAGATCTGTGGTGATTGCATTTGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367902] SGN-U581659 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180516 [Download][View] Facility Assigned ID: FA0AAD10AG01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0148 Quality Trim Threshold: 12.5