EST details — SGN-E367906

Search information 
Request: 367906Match: SGN-E367906
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175987Clone name: TUS-22-M9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175987 is on microarray TOM1 spot ID 1-1-8.1.11.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18627 [cLED-24-B22] Trace: SGN-T54893 EST: SGN-E240996 Direction: 5' Facility: TIGR
Clone: SGN-C175987 [TUS-22-M9] Trace: SGN-T180521 EST: SGN-E367907 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E367906Length: 616 bp (958 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E367906 [] (trimmed) AAAAAGAAAAAATGGGACCACCCCGTTTTCACTGAAAAACAAAGTTTTCCTGCAAAAGTTAGGAAAAACAATTTTTAAGGGTTCAAAACCAACCT
TTTAAAACCATTTTTCCTCCTCCATACCGATTGCTGAAAAAAATCTACTACTATTTTTTCCCACCCCCATCCCTAAAATATAAAAACTTTGCCCG
GTTTCTTTCAAATGCCCAAGCTTTCTCCCTCCTGCCCTCCTCCTTTTCCTCCGGAGGGAAGTCGTTTTTGATGTTAAAAGTTTTTCAAATCTCCC
CCGGAGTTTTTCCTTTGATCATGTTTGCCCCAGTCTGACGGGTCAAATCAAGCAAACTTTTGATTTTCAGGTAGTTACCCCCCAAAATCAAATCA
AAAAAAGTTCCCTGATCAACTTTAACAAATTCAGCATCAAAAACCTTCAATTCATCCTCAGCGGCCTTGTCCTTTGTTTTAAACGAGGCTTCGAC
AGGGCCCTTAAAGTACTCAATCCCCTTTGCCAAAATCTTGCTTGTAACATTAGGGAGAGGGATGTTAAACCCGGCGCAATCCCCCTCAATCAAGT
GCTTGGGGGTCTGGAATTCCAAACCACCCCCCTTATCCCCCTCAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367906] SGN-U592545 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180520 [Download][View] Facility Assigned ID: FA0AAD10AG05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.899 Expected Error Rate: 0.0286 Quality Trim Threshold: 12.5