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EST details — SGN-E367940

Search information 
Request: 367940Match: SGN-E367940
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175859Clone name: TUS-22-H1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175859 is on microarray TOM1 spot ID 1-1-8.4.11.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17233 [cLED-19-B10] Trace: SGN-T53473 EST: SGN-E237559 Direction: 5' Facility: TIGR
Clone: SGN-C175859 [TUS-22-H1] Trace: SGN-T180690 EST: SGN-E367941 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E367940Length: 591 bp (910 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E367940 [] (trimmed) GGGCAACTGATTTTAACATATATATTTTTTTTCACTTTAAACAAGTTTTGATGTTTACAAAGTTAAAAAACTGATGAAAAGGATATACTAAAACT
ATGAACAAGGCTAAATACAAAAGTGCCACGTTTACCTTGCTTTATGCAAAAAATAAACAAAAACTAAAGACTTTTGAAACTTTTTCAATTGCTGT
TTTTGAAAAATTAAAAGCTGCAAATCAAAAACTAACATACCCCCAAACTACAAACCAAAAACTTTTGTTTAAGCTGAACTACATTTAGCGGGGCT
GCTGGATGCGGCGAAGGCTGTTCTTTGGGCTAACAATTTTTGCTGGTTTCTCGTACAACTTTGGAGGTTCGATAAAAAATTTTGGCTTTGGCATG
CTCAGGGTCCTTACAAGTGCCTCAAAACCCTTGGGTAAGCCATTGACACCAGAGAGTGATGATTTGATGCCTTGTTGCTCACTTTCAAATGATTG
AAGAAATTTTTCAAACTGAGCTTCCATATTCAAAATATCCTCATCGACATCAAGGTCAATGTTTTCAGGAAGTAAGTCAGCAACATTATTTCCAG
CAAAACCAAAATCATCATCAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E367940] SGN-U584748 Tomato 200607 Build 2 75 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180689 [Download][View] Facility Assigned ID: FA0AAD10CD01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.905 Expected Error Rate: 0.0122 Quality Trim Threshold: 14.5