EST details — SGN-E368101

Search information 
Request: 368101Match: SGN-E368101
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175980Clone name: TUS-22-M2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175980 is on microarray TOM1 spot ID 1-1-7.1.11.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18611 [cLED-24-A5] Trace: SGN-T54775 EST: SGN-E240878 Direction: 5' Facility: TIGR
Clone: SGN-C175980 [TUS-22-M2] Trace: SGN-T180581 EST: SGN-E368102 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E368101Length: 631 bp (901 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368101 [] (trimmed) AAGCAAACACTCCAATTTTATTAAGAAAGACATGCTAAAATATATAGATATACGTTAGCATGTGTTTATTTTACAACATAACATAACATAGCATA
AACATACTAGACTTTCTTGAAGTAGACCCCAAGAGGATTTTCGTTGACAAGAGCCAAACGCCTTCTTCCATCTTGATTAATTACACCCACTTTTG
CACAGAAGTCATCACCACGGCAAAATGGACAAAGCACAGGACGAGTAATAGGGCAATAGAGTAAGTTGTAACCAAATGTTGATGCTTTAACAATC
TTGAAATAACTGCTATCTACTTGTCCTATGCTTCCTCCCGTCTCCAACAACATCGCCCTATAGTATGCATTTAAATTACCGGCTTTCCAAATTGT
ATAACTAACACACAATTTCACTGTTGCAATGTTGAATTGTAGGTTCATTAGTTGATCTTCAAATATACCTCCAGATAAAGGAATGAATCTAACGG
GTGTACCGACAGTTCCAACATCAGAATTGTAACGAAACACACCATCTAGACAAGGGGCAGATGATCTTGGAGATTTACCTAGGTATACATCACCA
CCTAACGCACCCCAAAATGTGGAAATAATGGTCTCGCGGTTTTTTTTTTTTTTTTTTTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368101] SGN-U577283 Tomato 200607 Build 2 78 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180580 [Download][View] Facility Assigned ID: FA0AAD10BG01FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5