EST details — SGN-E368356

Search information 
Request: 368356Match: SGN-E368356
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176211Clone name: TUS-23-F17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176211 is on microarray TOM1 spot ID 1-1-8.2.10.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C21533 [cLED-34-F21] Trace: SGN-T57402 EST: SGN-E243628 Direction: 5' Facility: TIGR
Clone: SGN-C176211 [TUS-23-F17] Trace: SGN-T181282 EST: SGN-E368355 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368356Length: 685 bp (945 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368356 [] (trimmed) CAGGGTTCTTCCAAACCCGCAAGCCTGGACATTGTGGAAATAGATGGCTCCACCTCAGCACCGTCATCTATGTCTAATCACGAGACCAATTTCAT
GAAAAGCACAAGTCCTTCTGGTCCTGGAGCCACCACACGAAAGAACACAGTGCAAGTAGAAAGGCAAAACTCTGAAGTATCATACTTTGCTGATG
ATGAGGATGGAAAGCGGAAAAAGTACACGAAGAGGGCAGGTTCATTTCGCCATAAGTTTATGAGATCATTGCTCCCTTTTTGGTCGAGTTCCTTG
CCAACTCTACCAGTAACTGCACCACCACGAAAAGATGCATCAAATGCTGATGAAGTCACCGAAGGTCGTCAGCGCCATCTTAAATCTTCAAGAAT
GGATCCAAGAAAACTCCTCCTCATTATAGCAATCATGGCTTGCATGGCAACCATGGGTATCCTGTATTATAGAATTGCTCAGAGTGGTCTGGATG
AGGAGCTGCCTGATAATGAATAGTGGTAATTTTATGGCCATTAAGTCTTTGGTGGCCTGAGTTACGGCTATACATCATTTGTCAACAGGACCGAC
AAGAGTTGCTTATTCTTCTGCTGCTTGTACGTGCTCAGTCTTTGTTGTCATCATGTCACTGTTTTGGGTGGAACACANAATTCTTGGTAACCTGT
GATTTATAGAGATACCTCCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368356] SGN-U570213 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181283 [Download][View] Facility Assigned ID: FA0AAD11CC09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.987 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5