EST details — SGN-E368522

Search information 
Request: 368522Match: SGN-E368522
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176306Clone name: TUS-23-J16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176306 is on microarray TOM1 spot ID 1-1-1.2.10.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26412 [cLEF-40-E8] Trace: SGN-T59970 EST: SGN-E246118 Direction: 5' Facility: TIGR
Clone: SGN-C176306 [TUS-23-J16] Trace: SGN-T181448 EST: SGN-E368521 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368522Length: 723 bp (963 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368522 [] (trimmed) CTCGTGCCGGTTGGGGTATATCTTACACAGAATGTTTCAGATCACCTTTCTAGTTCTGCATTCATGTCACTCGCTGCCCACTTTCCTCTGAAAAC
AGACAGTACTCAGAAGCATGAAGGAAATACAGGTATTATAATTGAAGAACCTGAAGAGTGTGCAACAGACCCCAATGTTTCCATCAGATGGTATG
AAGATCAACCAAATCAGTCAACCCATTGTCAGGATTCTTCAGGAGTCTATAATACAGATTCAAATGAAGAAAAACCAGCTGTCAATGACTCTGAA
TCAAGTGAAAATAGCACAGAATGCATAAAATCAGCAGAATGTTCTGTAATTCTGCAATCAGATTCTTCTAGAGAAGGCTCAGATCTGTATCATGG
ATCAACAGTTACAAGTTCCCAAGATCGAAAAGAGTTGAATGATTTGCCTTCTTCTCCGAGTTCTGTTGTTTCTTCTGAGATCTCTGCTGTTATTC
AAGCTTCAGAAGGAACTGACTCAAGCAACTTTTGCAGCTCCACTTCTTTTTTGAAGCTATTACAGATGGCAGGAACTTCAGGAGCACAAGGAACC
AGGTGCACTGAACATCTACAAGAAGGTGAAAACGTTCCATTCCTTGAAAAGGAACTTATTTCCCCCAAAAAAGTGTATTGTCAGCAGAATCTGCA
CATTCAGCACTGTACACAACCCCTCAAAATAAGTTGGACATAGAGACAATGACTGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368522] SGN-U569248 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181449 [Download][View] Facility Assigned ID: FA0AAD11DE08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0011 Quality Trim Threshold: 14.5