EST details — SGN-E368621

Search information 
Request: 368621Match: SGN-E368621
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176450Clone name: TUS-23-P16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176450 is on microarray TOM1 spot ID 1-1-1.4.10.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26777 [cLEF-41-I23] Trace: SGN-T60233 EST: SGN-E246818 Direction: 5' Facility: TIGR
Clone: SGN-C176450 [TUS-23-P16] Trace: SGN-T1406 EST: SGN-E378375 Direction: 5' Facility: Giov. Lab
Clone: SGN-C176450 [TUS-23-P16] Trace: SGN-T181549 EST: SGN-E368622 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E368621Length: 690 bp (948 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368621 [] (trimmed) AGTCAAACTCCAATATAATAAAAAACGTTTAAGAGACGCAAAAATCAAAATAACATTATAAGGGAAAACTCGTAATACAAAGCAGAATACATGAC
GAACTTGGACGTTTACATCTTGTGCTAAACCTTCGTCACAACATCGGCAAGATGAAGAACCACTTGCACTATATACAAAATTAAGCAAACAAAAC
ACCACTTGCCACAAGTCCACACAAAACAACATTCTCAACGAGGAACATGTTGAGTAATGTCGACTAAGCTATACTACATTCAGCCGCCTCAAGAA
GGAAAACAAAAAAGGAGAACCCGACTATATCTCACAGGTCGTAAGGAGGACGAGGGCTTCTGGGTCCAACCCCACTGGCATTCTCGTATGCAAAT
GACGCTGATCGCCGACGGAACCGAAATGCTTCTCTTCCAGAAGAACCAGAAAAAGGAGATACCGGAGGAGTAGTACCGGCCGGAGAAACGGGAGG
TGAATCTCTATTCTGACTCCCGGAAGGCTTTACGATCATGATACTTCTCGTCACCTTCACCGCGTCCTCACTTGCTTCCTCAGTAAAGGATCTCG
GTGTTGAAACTTCTGATTCCTTGCCGGAATTTGAACGCTGACTAAAAGTAGAATACTTCCGGAGCTTCCCGAGGCCACTATCTGGCCGGGGACCG
GCAACGGTGTCGTCCCAGAGCTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368621] SGN-U582094 Tomato 200607 Build 2 58 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181548 [Download][View] Facility Assigned ID: FA0AAD11DH08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0011 Quality Trim Threshold: 12.5