EST details — SGN-E368684

Search information 
Request: 368684Match: SGN-E368684
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176016Clone name: TUS-22-N14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176016 is on microarray TOM1 spot ID 1-1-3.2.11.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C18702 [cLED-24-F2] Trace: SGN-T54901 EST: SGN-E241004 Direction: 5' Facility: TIGR
Clone: SGN-C176016 [TUS-22-N14] Trace: SGN-T180867 EST: SGN-E368685 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E368684Length: 564 bp (926 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368684 [] (trimmed) GGCAAAAGTAACTTTCTTTTAATTACATAAAGCTGCATGAAGCATTATTATTATTATTTTTTTTTTTCAAAAAAGGACATTTTGCTTGGAGTCTT
TCAAAGTAAAGACCAAGCTACAAATAATTGATACTACAAAATACAAATTTTGCTAAATTTACAAATCAACTAGGCTACTATAGCCATGTTCCAAA
AAAAATATTTGCCTAGAGACTAAATAATAGACACTATAAGATACAGATTTACTTGAATGTACTAACTTATAAGGCGATTTCCGCCATGTTGTTCC
TTACTGTACACTTTAATCTCGCGAAACTGATGAATCAACCAACCAACTTGAAGGGTGTGCTTACTGCTCACAACTCCTGCTACTACTCAACAAGA
GCAGGAGAATAGGAACAAAAAGAACGAAAGAATGTATCCAGTCACCGCTGCAAATGGTCTAGCTATCACAACAAACAGTAGGTAGGAGCTCCTCA
TTACGGTGGACTCCCAAATCATTCGATAACCTATTACACATCTGTCTATATACTGTTGAATCCCCTGAAGACTTTTGTAACTCTACCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368684] SGN-U575600 Tomato 200607 Build 2 39 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180866 [Download][View] Facility Assigned ID: FA0AAD10DG07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.938 Expected Error Rate: 0.0093 Quality Trim Threshold: 12.5