EST details — SGN-E368716

Search information 
Request: 368716Match: SGN-E368716
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175814Clone name: TUS-22-F4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175814 is on microarray TOM1 spot ID 1-1-5.2.11.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C16847 [cLED-17-M17] Trace: SGN-T52765 EST: SGN-E238323 Direction: 5' Facility: TIGR
Clone: SGN-C175814 [TUS-22-F4] Trace: SGN-T180899 EST: SGN-E368717 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E368716Length: 693 bp (921 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368716 [] (trimmed) ATGAGCAAGAGAGGAAAAAATCAGCTTTTTATTTGGTAAAAAATATTGAGGCACCCCTATTGTACAACTTTACAGGGAGAACAGATGGAACTGTG
AAGTGTCATAAACTTGGCATCTCAGAAGAAATGGTAGTATCATTGGTATTGGAACTAGTCCAATTTTATGGACCTCAAATCATTTCTATCTTCAA
GAACAAAAATGGCACCATTAATACAAGCTTGAGATCTGAAAGAGGCAAACTATCATCAGAAAAAACAACTACGCCGCCTGCACAGGTGACATGTC
CTGTAGGATATTTTGTTCCCAGACACTTCATCCGTATTAAAGTAGAAGCTTCTTGATGTCACTGAAGTTAGATGACAATGCTGAAACGAACGCAC
CTCCAACCTTCCCATCAAAGACGCGATGATCAGCTGATAATGTCAAACTCATCTTGTTAACAACAGCTGGTTTCTCAATTCCGTCAGCACCAACC
ACAGGTTCGACAACTTTATTGCCCCTACCAACAGCAATTATACCGGCCTGAGGAGGGTTGATAATTGCACAAAACCGATCCACTGGAAACATGCC
CAAGTTTGAAATGCTGAAAGTGCCACCTTGGAATTCATTAGGTTTAAGCTTTCCAGCTCGTGCCTTTCCAGCAAGCTCCTTGATCTCCGCAGATA
TTGAGGATATGGATTTTTGATCACCATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368716] SGN-U568945 Tomato 200607 Build 2 31 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T180898 [Download][View] Facility Assigned ID: FA0AAD10DC02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5