EST details — SGN-E368919

Search information 
Request: 368919Match: SGN-E368919
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176879Clone name: TUS-25-B13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176879 is on microarray TOM1 spot ID 1-1-4.2.8.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28083 [cLEF-46-I13] Trace: SGN-T61687 EST: SGN-E247276 Direction: 5' Facility: TIGR
Clone: SGN-C176879 [TUS-25-B13] Trace: SGN-T181873 EST: SGN-E368920 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E368919Length: 741 bp (928 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E368919 [] (trimmed) CTACAAAGGGAAGTCTTATTTGAACATATAGTTCACTGAACTCATAAACAAAAAGCTGATTTAAGTTTACTTTAGATAAATAAACTCCAAACAAC
CTTCAAAAACTAAACTGGACGCCTTCTGCATGATCTTCTGTAGCTGTAAACCCCGCTATTTTGTGACAAAAGTATTTCTAAAAAGACGACATTTG
GGTACTTCTCTCCTTTCCAAGTCTGACGGAGTTCACGTAATCAACTGGGCTGTGGGCAGAAATACCAGGAAGGAAAAGTCCTAGCACGCGAAGCA
CAACTGATTCCCAGCATTCCTCATACTCGGCTCCATATATGTGACCCATTGTAAAGCTTCTGATGAGCTCCCACCCAGCATTCAGATACAATGGT
ATCAGAAATCGCAGCCCAAAATAGTTTCTGTTTGGCTCTTCATCGACGTTCTGCTCAACATATAAGCTGTTGTAATACTGGCAAATCCCAAAGTG
TTTAAACAGGAATGTTTTATTATCATAAGGTAATCTTGGCACAAGATCATTGGAATAAACAACTCTGAAGTACTTTGGGACTGGATGTTCCAAAT
GGGCTTCCATGAACCTCCCTAACTGTCTGTTCCCAATCCTTGGCTGCCCATATGTATATATCCCCAATAACCGTTCCATGACATTCATCTCCTCA
TGCAGCACTAGGATTGTCGGGAATAATATAGCTAATGCTCCACCAAGGCTATGGCCTGTACCAACAAACTTTGCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368919] SGN-U582719 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181872 [Download][View] Facility Assigned ID: FA0AAD13CA07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5