EST details — SGN-E368935

Search information 
Request: 368935Match: SGN-E368935
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176963Clone name: TUS-25-F1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176963 is on microarray TOM1 spot ID 1-1-8.2.8.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28753 [cLEF-49-B9] Trace: SGN-T62575 EST: SGN-E249067 Direction: 5' Facility: TIGR
Clone: SGN-C176963 [TUS-25-F1] Trace: SGN-T1431 EST: SGN-E378684 Direction: 5' Facility: Giov. Lab
Clone: SGN-C176963 [TUS-25-F1] Trace: SGN-T181887 EST: SGN-E368934 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E368935Length: 580 bp (921 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E368935 [] (trimmed) GCTTTGTGGAGCTTACGGGTATTCCTGTGGCGAGTACTTTGATGGGTCTTGGAGCTTTTCCAAGTGGGGATGAGCTTTCTCTTCAAATGTTGGGT
ATGCATGGGACTGTGTATGCTAATTATGCGGTGGATAGTAGTGATTTGTTGCTTGCATTTGGGGTGAGGTTTGATGATCGAGTTACTGGTAAATT
GGAAGCTTTTGCTAGCCGAGCTAAGATTGTCCATATTGATATTGATTCGGCTGAGATTGGAAAGAACAAGCAACCTCATGTTTCCATCTGTGCAG
ATATCAAGTTGGCATTACAGGGTTTGAATTCCATATTCGAGAGTAAAAAAGGTAAGCTGAAGTTGGACTTTTCTGCTTGGAGGCAGGAGTTAACG
GAGCAGAAGGTGAAGTACCCATTGAATTTTAAGACTTTCGGTGAAGCCATCCCTCCCCAATATGCTATTCAGGTTCTTGATGAGTTAACTAACGG
AAATGCCATCATTAGTACTGGTGTGGGGCAACACCAAATGTGGGCTTGCCCAACACTATCAAGTACAAAAAAGCCACGCCCTATGGGCTTACATC
TTGTGGATTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E368935] SGN-U572742 Tomato 200607 Build 2 63 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181888 [Download][View] Facility Assigned ID: FA0AAD13CC01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0068 Quality Trim Threshold: 14.5