EST details — SGN-E369242

Search information 
Request: 369242Match: SGN-E369242
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176950Clone name: TUS-25-E12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176950 is on microarray TOM1 spot ID 1-1-5.1.8.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28728 [cLEF-49-A22] Trace: SGN-T62529 EST: SGN-E249021 Direction: 5' Facility: TIGR
Clone: SGN-C176950 [TUS-25-E12] Trace: SGN-T181733 EST: SGN-E369241 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369242Length: 609 bp (950 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369242 [] (trimmed) GGCGGATCCATAATTTTATTGGTGGTTGACTCTGGGTGGTTGAAAGAATGTCAGGCATGGAGGATGGAGCTGAAAAGTCGAACCCATCCACCCAA
CAAGAAGAGGAAGTTGTTAAAAAGAAATATGGAGGAATGATACCCAAGAAGCCACCTCTAATCTCAAAGGACCATGAGCGTGCTTATTTTGATTC
TGCTGACTGGGCTCTTGGAAAGCAAGGCGCAGATAAGAAGCCCAAAGGTCCACTGGAGGCACTTCGCCCAAAATTGCAGCCAACACAACAGCAAA
CGCGATACCGCAAGTCTCCTTGTGCTCCATCAGAAGGTGAAGATGGAATTGCTCCGTCGGAGGATCCAACTGCAAATGAATGAGAAGGAGATGTT
GACTCTTTGTCGAAATGTCATAAGCTGTTTACATGTCTGCTCTTAAGAATTTTATAAAATAAAAATGATTCACGGGCTGTTTCAACTTTTACTTG
AGGCTGGTATTGTGTTGCTGTAACATTGATGTAGGATAATTTCTTATGCTGTCCAAATGAAACGAGTTTCCTGTTTGGGTCTATCCTTCCCAGGA
ATTTATTTTAGAACTAGATGCTAAAATGATTATGTTACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369242] SGN-U568406 Tomato 200607 Build 2 29 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181734 [Download][View] Facility Assigned ID: FA0AAD13BC06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0057 Quality Trim Threshold: 12.5