EST details — SGN-E369439

Search information 
Request: 369439Match: SGN-E369439
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176381Clone name: TUS-23-M19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176381 is on microarray TOM1 spot ID 1-1-6.1.10.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26625 [cLEF-41-B18] Trace: SGN-T60497 EST: SGN-E247082 Direction: 5' Facility: TIGR
Clone: SGN-C176381 [TUS-23-M19] Trace: SGN-T181014 EST: SGN-E369440 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369439Length: 692 bp (907 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E369439 [] (trimmed) GGGCGCGAAAAACAGTAACTTTTATTCATTAATAAAATCAATAATGCAGCAGCTACAGCCTAAAATTTACAGGAGCATAGGTACTAACTCACAGG
GTAAACTGAACAGAAAAATGCCTAATTTAGGCAAAGAGACCTAACCAAAAGTATGATGTATGTTTTTCATCATTGAATCTTCGATAGGGCTGCTT
TGGTTAAATGAACATGCAGTCCTAAAATTCTTTCACCTCCAACGCGGATTTACACCGTTCATTGAAACAACGTCTGAATACAGTTTGCTAAGTCA
GGCTATACTGGATGGTGCCAACCTCTTTGTGAGCTGCAACTGCAACAGCTGCAGCACCGACAGCACCAAATTTGGTTTGGGCCTGTAGTAGTTTT
GCATCTATTGCAATTTGACCACCCAACTGTGCTACTTTTTCTTGTGCTGGATAATACGGGTTGGTGTTCATCTCAACACTCATGTTGCATTGTGC
AGGTAGGGGTCTAACTTGAGTGGCGTCCTTGGATTCTGTCCCACACTTCTCTCGATTCCCCGGGTTCATCCTGAACATATAATGTGGAGAAATGC
CATGAGGAAGGAGGCCAGTATTCTGTGTAAGCATTCTTCCGTCATATGGTAAAATTGGCCCTACAACTCTCCCAGGTTTGGCTGTACCTGCATGG
ACTCGATGTGGGGGTCGTGAAATGTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369439] SGN-U579296 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T181013 [Download][View] Facility Assigned ID: FA0AAD11AG10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0098 Quality Trim Threshold: 14.5