Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E369569

Search information 
Request: 369569Match: SGN-E369569
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177062Clone name: TUS-25-J4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177062 is on microarray TOM1 spot ID 1-1-5.2.8.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28922 [cLEF-49-J8] Trace: SGN-T62468 EST: SGN-E248960 Direction: 5' Facility: TIGR
Clone: SGN-C177062 [TUS-25-J4] Trace: SGN-T182059 EST: SGN-E369570 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369569Length: 746 bp (934 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E369569 [] (trimmed) GCGTATGGGAAGTTCCTTGCATTTCTAAACCAAAACGCAATCCATATATTACAGAAGCTTGTCAATGCAATGCAGCAAATGACAATTAGGCAATA
GAACCTAACCAGAATACTAGGATCAAACAAAATGAGAGTTCCATTCAAATAAAATTTCAAAGAGGAGGTTTCAATCCGTAAATATAACATAGCTG
AGCCATGGTGCTCTTCATCTGAGGTCTGCAAGGACATCTTTCGTCCCTAGAATCAGTCAGCAGTCCAGCTCTGCTCAACAATTTCTCTCACTCTG
CGATTGTACTCCCTTTTATTCTCACTGAACATCCGAGCTGCTTCCGAGTTTGCAGGTGAGTTGGGGTTTGGATCACACAGCAATGACTGAATGGA
TGTAAGTATTGCCGCAACATCATAAATTGGACTCCATTGATTCTGAAGAATATCCAAACATATACTTCCATCTGCATAAATATTAGGATGAAACA
TGCGAGAAACAAACCGCACTGTTGGTGGCTTGTTGGGGTAATCCTCAGAGAATTGAAGAGTCAACTTGAACGTACCTGATGTTCTCAAATAGTAT
AGTTACAACCGAACTAATTAATTCATATCAAAACTAAGGCGATATGAAAAAGAAATCATATTATGTCAAAAGAAAAGGATGGCGAAGGTAACAAA
AGCCACAGGACGCACTTGCTAACACCAACAACCTTTACTTTTTGCAGAGAGTAATAAACTGACAAGAGATGATAATACAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369569] SGN-U579005 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182058 [Download][View] Facility Assigned ID: FA0AAD13DE02FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5