EST details — SGN-E369627

Search information 
Request: 369627Match: SGN-E369627
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176930Clone name: TUS-25-D16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176930 is on microarray TOM1 spot ID 1-1-1.4.8.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C28195 [cLEF-46-N3] Trace: SGN-T61734 EST: SGN-E247323 Direction: 5' Facility: TIGR
Clone: SGN-C176930 [TUS-25-D16] Trace: SGN-T182115 EST: SGN-E369626 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E369627Length: 669 bp (945 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E369627 [] (trimmed) GGCGATTCGCGTCGTTTTTCTCTCTATCATTGCCACCGTTTATCCTTTTCATCGGAACTTCTTAGAATCATCTATTTCTACAGCCATGGCTTCCG
AGAACTTCAGCGACAAAAACGCTGTTTTTCGGAAGCTCAAATCCAAGCCTGAAAACAAGATGTGCTTCGATTGCAATGCTAAGAATCCTACTTGG
GCATCCGTGACGTATGGGATCTTCTTGTGTATTGATTGCTCGGCAGTCCATCGCAGTCTCGGCGTTCACATCAGTTTCGTTAGATCAACAAATTT
AGATTCGTGGTCTCCAGAGCAGTTAAAAATGATGTACTTTGGTGGAAATAACCGTGCTCAAGTTTTTTTCAAGCAGCATGGATGGAACGATGGAG
GCAAGACTGACTCCAAGTATACCTCAAGGGCTGCTGACTTGTATAGGCAGTTACTCTCAAAAGAAGTTGCTAAAAGTACTGCAGAGGAAGCAGCT
TTGCAAGCAGCTTTGCCAGCAGCTTTGCCAGCATCTCCTGTTGCTTCTCAGGCTGCACAGGCTACTAATGTATTTCCGGATATTAAGACTAGTGA
ACCTCCAAAAGAAACGTCTTCGTTGAAAGACGAAAAAACCGAGGTTATTGCTTCACCTAAAGCCTCTCAAGCTGTTTCCACCTTTTTTTAAGAAA
CCTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E369627] SGN-U582608 Tomato 200607 Build 2 47 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182116 [Download][View] Facility Assigned ID: FA0AAD13DB08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.984 Expected Error Rate: 0.0061 Quality Trim Threshold: 14.5