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EST details — SGN-E370056

Search information 
Request: 370056Match: SGN-E370056
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177506Clone name: TUS-26-L16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177506 is on microarray TOM1 spot ID 1-1-1.4.6.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C37584 [cLEG-42-I13] Trace: SGN-T72384 EST: SGN-E259623 Direction: 5' Facility: TIGR
Clone: SGN-C177506 [TUS-26-L16] Trace: SGN-T1449 EST: SGN-E378271 Direction: 5' Facility: Giov. Lab
Clone: SGN-C177506 [TUS-26-L16] Trace: SGN-T182669 EST: SGN-E370055 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370056Length: 265 bp (920 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370056 [] (trimmed) GAGCAGTCCATCGCATTACGGGTGGAGAACTGTTTCGGACGGTGATGGAGTGTCCATATTCGGTGGGAGCCATGTTTGGGTGGATCATTGTTCTT
TGTCCAACTGTAAGGACGGTCTGATTGATGCGATTATGGGGTCTACAGCAATATCCATTTCAAATATATTACATGACACATCATGATAAATCTAT
GCTCTTGTGACATAGTGATACATATACTCAAGATAAAAACATGCTAGTAACTATAGCTTTTAATTACTTTGGTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370056] SGN-U585246 Tomato 200607 Build 2 318 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182670 [Download][View] Facility Assigned ID: FA0AAD14DF08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0144 Quality Trim Threshold: 14.5