EST details — SGN-E370233

Search information 
Request: 370233Match: SGN-E370233
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178144Clone name: TUS-28-G6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178144 is on microarray TOM1 spot ID 1-1-3.3.4.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64621 [cLEM-6-K9] Trace: SGN-T84401 EST: SGN-E270645 Direction: 5' Facility: TIGR
Clone: SGN-C178144 [TUS-28-G6] Trace: SGN-T183422 EST: SGN-E370232 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370233Length: 731 bp (906 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370233 [] (trimmed) GGGCCATTCTATGAAGCCCAAATAAAAAGCCCAAATTGCTAATTGCCTATCAATTCCTGACGAACACGATACAGTTCCCCTCTTGTAAAAATCTG
TGCAAACCCTAATTATCGTGTGAGATTGAGATTGAAAAATGGTGTGCATACGAAAGGCGACGATAGATGATTTGCTTGCTATGCAAGCATGCAAT
TTGTTATGCCTTCCTGAGAATTACCAGATGAAGTACTACTTCTACCACATACTTTCGTGGCCTCAGCTTCTGTACGTTGCTGAAGATTACAATGG
TAAAATTGTGGGATATGTGTTAGCAAAAATGGAAGAGGAAACCACTGAGTGCCATGGGCACATCACTTCCCTTGCCGTAGTCAGGACTCACCGGA
AACTTGGTTTGGCTACTAAGCTCATGACCGCTGCTCAGAATGCTATGGAACAGGTGTTTGGAGCAGAGTATGTGTCTCTGCATGTTAGGAAGAGC
AACAGGGCCGCATTTAAGCTGTATACAGAGACATTAGGATATAAGATTCATGATATGGAAGCCAAGTACTATGCAGATGGGGAAGATGCTTATGA
TATGAGGAAGGAATTGAAGGGCAAGAAGCACCACCAGCATCACCATCACCACCACCACCACGGTGGTGGGTGTTGCTCTGGTGAGGTGAAGGTAG
GACCAAAGGAAGGAGCAGCAGAAACAAAAGCAGCATAATTATGGACCTAAAGTTTGGGACTTGGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370233] SGN-U576586 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183423 [Download][View] Facility Assigned ID: FA0AAD16BD03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0013 Quality Trim Threshold: 14.5