EST details — SGN-E370284

Search information 
Request: 370284Match: SGN-E370284
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178059Clone name: TUS-28-C17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178059 is on microarray TOM1 spot ID 1-1-8.3.4.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64485 [cLEM-6-E22] Trace: SGN-T84591 EST: SGN-E270835 Direction: 5' Facility: TIGR
Clone: SGN-C178059 [TUS-28-C17] Trace: SGN-T183212 EST: SGN-E370285 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370284Length: 643 bp (892 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370284 [] (trimmed) AAAAAAAAACAGAAGATATAGTACATATTTTGTAGTCACCTCTATTTTGATTTTTGACTATTTGTAAAAAACAAAATCATCAAACACATGATATA
CATTAAGGAACATTATTCCTTTATACCACAGAGAAGAAGAAAAAAAAAACCAGGAACATACCACATGGTAAAACAATAATAATTAAACTCAAACA
ACAAAAAACATAACACAATTAAGCAAAAGCAAATGGATTAAGCTTCCATAAGAAACTCCTTATCCTTCTCCAACCTCTCCATGGCATTTGCTTCC
AAGCTAATCTCCACATCAATTCCTCTTCCTCCATTTTTCTCTGGATACAAATACACCATCCCGTCAAATCTATTGTTCAACCCACTCCTCACGAT
CTCCGCTTTTCCCCATCCAAAATCAACCTCATACACCTTAAACCTCGGCGAACTCCCCACCGCCACACAGTTCACTCCGGCATCTTTGTACGCAA
ATATCTTCGGACTACTCTCCCATTCCTTGTTCCTTTCTTCAATCGCCTTCGCATCGTGCTTCGCTATGGCTTGCTGAATCATCCCTGCCGCAAAC
TCAATCGGATTCGATAGCAGCAATCCCGCCGCCGTTACAGTGAAAATCGCCTGAATTAGGTTTCCGAAGTAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370284] SGN-U581064 Tomato 200607 Build 2 36 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183211 [Download][View] Facility Assigned ID: FA0AAD16AB09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.942 Expected Error Rate: 0.0009 Quality Trim Threshold: 14.5