EST details — SGN-E370456

Search information 
Request: 370456Match: SGN-E370456
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C178671Clone name: TUS-29-M5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C178671 is on microarray TOM1 spot ID 1-1-4.1.4.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72348 [cLER-1-O2] Trace: SGN-T92126 EST: SGN-E280572 Direction: 5' Facility: TIGR
Clone: SGN-C178671 [TUS-29-M5] Trace: SGN-T183798 EST: SGN-E370457 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E370456Length: 644 bp (880 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370456 [] (trimmed) AGAAAAGAAAAACGATGAGTGGAATATCGCAAGACTGGGAGCCGGTAGTTATCAGGAAGAAGGCGCCTACCTCCGCCGCTCGCAAGGATGAGAAG
GCCGTTAACGCCGCCCGTCGCTCCGGCGCCGAGATCGAAACCGTCAAGAAGTCTAATGCGGGCTCAAACAGGGCTGCCTCTAGTAGTACATCATT
GAACACTAGGAAACTTGATGAAGACACCGAGAACTTGTCTCATGAAAAGGTACCAACTGAACTGAAGAAAGCTATCATGCAAGCACGACAAGACA
AAAAGCTGACTCAGTCTCAACTTGCTCAATTGATAAATGAGAAGCCACAGATCATCCAAGAATACGAATCAGGAAAGGCAATTCCAAACCAACAA
ATAATCTCAAAACTGGAGAGAGCTCTTGGAGCGAAACTTCGAGGGAAGAAATAAAATAAAGTGTGAGCGCACAATTGAGCCTTATGGATTGTCAC
TGTCTGTTTGAATCCAAAATTTGGTCATGTACACAGACTTTTCTTTAATCATTGGCTATGTTTTTGCTTCGTTATGCCTGGATTGACGTATACTG
TTTTCTCTGTTGAATTAGCTGTTTCTTCTGTGGAAATTNTGAACTCTCTCTTTTACAGAACCTTTTTTCTGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370456] SGN-U563353 Tomato 200607 Build 2 34 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183797 [Download][View] Facility Assigned ID: FA0AAD17AG03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0049 Quality Trim Threshold: 12.5