EST details — SGN-E370540

Search information 
Request: 370540Match: SGN-E370540
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177622Clone name: TUS-27-A12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177622 is on microarray TOM1 spot ID 1-1-5.1.6.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C46681 [cLEI-13-F23] Trace: SGN-T82638 EST: SGN-E268577 Direction: 5' Facility: TIGR
Clone: SGN-C177622 [TUS-27-A12] Trace: SGN-T182916 EST: SGN-E370541 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E370540Length: 698 bp (886 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E370540 [] (trimmed) ATGCAAAGGAATTAATCACTAAGCTTCTATTGTTACTAAAAGCCACTTACAAGTTACAACAAAGGATGATACAAGTATTGGATACCCTAAAACTT
ACAATGCCAATAAGAAAACTCACACTATTAATGTACACTGAAACAGCTAGAAATTTGAAACTTATTTGACATCATTTTTGATATGTGTAAAAGCT
AATTCATTCCTTGTTGGATAAATTGTGAAGAGCTAACATCAGTTGTACTGTAAAATGAGTCCTCTGCTCCACCATAATAGGTATCTTCCTTCTCC
TCGTTCCACTTCACGACTTCTCTTATATACTTAAACGCCTCATCAACTGTAACTCGGTCTCTTGCCCGAGCTTGCCATACAAATAGTTTTTTACC
AGTGATAGAAGTATAAAGGTCTTTAAACTTCATTGCGATATAATAGTATGCTTGGTTTGCCAGTGATAGGTTATTATGGTGAGTCCATACTGGAC
TGAAATCACTGAACCACTCGCAAGAGTCCAATGGTACACCGATGATCTTCTCCTCGAATAGATCATACTTGTTCAAGATTAAAACGAATGGGGTT
TCTTTGAAACAGGGATGTCTTACCATTGTTTCAAAGAGTTCTTTGATATGCATCATCTTGTTCTGAAGTAGTGTACCGCTACCACAGTCCTCCTG
AGTAAGCCACATCTGATCATATTCACTCAGGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370540] SGN-U569339 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T182915 [Download][View] Facility Assigned ID: FA0AAD15BA06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0038 Quality Trim Threshold: 12.5