EST details — SGN-E370656

Search information 
Request: 370656Match: SGN-E370656
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177872Clone name: TUS-27-K22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177872 is on microarray TOM1 spot ID 1-1-3.3.6.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64169 [cLEM-5-F18] Trace: SGN-T85120 EST: SGN-E271315 Direction: 5' Facility: TIGR
Clone: SGN-C177872 [TUS-27-K22] Trace: SGN-T183030 EST: SGN-E370655 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370656Length: 697 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370656 [] (trimmed) GGAACTGGCTACCTGCTGAACTCCTAAGAGTGGTTGACATCCCCGTGTCATCTGCTGCTGTCCAGTCACTCATCGAAGGTTCTTCTAGTTCAATT
GAACATGGATGGGAGGTGGGTTGGTCCCTAGCTGCCTATGGAAATGCTCATCAATCATTTATTAACACCAAGCGCAGACAGGTTGAGCAAATGTC
CTTCCCAAGTCAAACTCCAACGGTGGAGGCGCAGTCCAGCCTTCCAAGTGTGATAGGAACATCGACCACAAGAATTGCTCTTCTGAGAGTTCCTT
CAAATCCATATGAGGTTTCATGCTTTTATTGCACTAAGTGGCATCAAACTTGTGAATGAAGCATCGCATTGCATTTGGCTGAATGAGCTTGCTTT
TTTTCTGGTAATTTTTGAAAGCTCCATTTTGTTGGTTTTTGATGGTAATGACTGGCTTAGGTATTCCCTTTCAGGACCCACCTCCATTAAAAGTC
TCTCCCTGGAGTAGGAGAGGTGATCTTCTTCTTGCTATGGGTTCTCCTTTTGGCATCTTGTCTCCCAGCCACTTTTCGAATAGCATATCAGTTGG
AACCATCGCAAACAGCTACCCACCTAATTCTCTGAATAAGCACTGCTGATTGCTGACATCCGTTGTCTCCCGGGAATGGAAGGTAGCCCAGTGTT
AGGGGAACATGCAGAGCTTATTGGTGTTCTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370656] SGN-U595191 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183031 [Download][View] Facility Assigned ID: FA0AAD15BF11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0040 Quality Trim Threshold: 14.5