EST details — SGN-E370826

Search information 
Request: 370826Match: SGN-E370826
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177697Clone name: TUS-27-D15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177697 is on microarray TOM1 spot ID 1-1-2.4.6.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C47601 [cLEI-16-M12] Trace: SGN-T83394 EST: SGN-E269170 Direction: 5' Facility: TIGR
Clone: SGN-C177697 [TUS-27-D15] Trace: SGN-T183062 EST: SGN-E370825 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370826Length: 724 bp (891 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370826 [] (trimmed) TCGTGATGACGCCATGCACCTATACAAAGCTTTCAAAGGATTTGGATGTGATAAAGCAGCAGTCATTAACATCCTTTCCCACCGTGATGCTACTC
AGCGTGCTCTTATTCAACAGGAATACAGAACTATGTATTCTGAAGATCTAAATAAACGCTTGGTCAAAGAGCTTAGCGGTAAACTTGAGAAAGCA
ATCTTGCTTTGGATGTATGATCCAGCCGGAAGGGATGCTATCCTAGTAAGGAAAGCTTTGAGTGCTGACGCCATTGATCTCAGAGCTGCCACTGA
AGTGATATGTTCACGGACTCCTTCTCAAATAGTACATTTCAAACAACTTTACCATTCCATGAATGGCATCTACCTTGAGCATGATATTGAGCTTC
ACGCATCTGGTGATCACAAAAAGTTGCTTCTAGCATATGTAAGCACAATGCGCTATGAAGGCCCAGAAGTTGACAGAGCTTCGGTTGATCATGAT
GCTAAAGCTCTTTACAAAGCTGGGGAGAAGAAACTGGGAACTGATGAGAAGACTTTTATACGAATTTTCTCTGAAAGAAGTAGGGCACACTTGGC
TGCTGTTAGTTCTGCTTATCACAGCATGTATTCCAGGAAGTTAAAAAAGGCTGTAAAAAGTGAAACCTCTGGACTCTTTGAGTTTGCTCTCTTGA
CTATTTTGCAATGTGCTGAGAATCCAGCAATATACTTTGCAAAGGAGTTACACAAGGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370826] SGN-U577552 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183063 [Download][View] Facility Assigned ID: FA0AAD15CB08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0070 Quality Trim Threshold: 14.5