EST details — SGN-E370866

Search information 
Request: 370866Match: SGN-E370866
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177895Clone name: TUS-27-L21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177895 is on microarray TOM1 spot ID 1-1-4.4.6.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64210 [cLEM-5-H18] Trace: SGN-T85122 EST: SGN-E271317 Direction: 5' Facility: TIGR
Clone: SGN-C177895 [TUS-27-L21] Trace: SGN-T183102 EST: SGN-E370865 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370866Length: 660 bp (858 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370866 [] (trimmed) GCTCGCTTTCTCTCTCTAAAAATCAAGAGAGAGAAAAAGGGCACAAGGATATAGAGGAGTCCATTAGTCTACACTTTTTCTCACCTTTGAATTCT
TCTTTGTTTGCTTGCTAAGCGAAATCGAAGAAAACCCACAAAACCAGATCGGCGATCCACCGAAAAGCAAGAAATCGGTTGTAAATGGGTCAACA
GAAGGCTTTGATCTATGCGTTTGTCGGTCGTGGGAATGTTATATTGGCTGAATACACAGATTTCAGTGGTAACTTCAACTCCATAGCTTATCAGT
GTCTTCAGAAGCTACCTGCTTCCAATAACAAGTTCACCTATAATTGTGATGGTCATACCTTCAACTACCTTGTTGATAATGGATTCACGTACTGC
GTGGTTGCTGAGGAGTCTGTTGGAAGACAAATTCCAATAGCGTTTTTGGAGCGCATTAAGGATGATTTCATGTCAAAATATGGGAGTGGGAAGGC
TGCGACAGCTCCTCCTAATAGCCTGAACAAGGAATTTGGCCCTAAGTTGAAGGAGCATATGCAGTATTGTGCTGAACACCCTGAGGAAATTAGCA
AACTTGCCAAGGTGAAAGCACAGGTTTCAGAAGTTAAGGGTGTTATGATGGAAAACATTGAGAAGGTTCTTGATCGTGGAGAGAAGATAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370866] SGN-U572420 Tomato 200607 Build 2 38 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183103 [Download][View] Facility Assigned ID: FA0AAD15CF11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0018 Quality Trim Threshold: 14.5