EST details — SGN-E370887

Search information 
Request: 370887Match: SGN-E370887
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177645Clone name: TUS-27-B11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177645 is on microarray TOM1 spot ID 1-1-6.2.6.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C46819 [cLEI-13-M24] Trace: SGN-T82613 EST: SGN-E268552 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E370887Length: 506 bp (903 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E370887 [] (trimmed) ATTTCGTAAGCAAGCAGTCTGAACATTACTCCCTATGCCAATTCTAATAGCCAAGCATAAAAAATTATTCAAAGGCATCATAAATCACACGCACA
CAACACCAAGCACACAAGTTTTAAGTATCCAAAATGCCGTCCAGAATCCACTACATAGGAAAAGACTATCCATTTGGCCAAGCCATAGTCGCAGA
ATGGTGAAAACTCAAATACGTATGTCCAGTTGCACTACTCAGCAACTACATGTACTCCTTATCCCGATTCAGGAGATCCATCTCCATAGGAAACC
AGACCTGCCTTCCCAGGGGGACTCGCCGAGGATGATACTGACTTGCCTCTGCTGACTTGCTTTGGTGATCGTGAGCCCCGAGATGATTTCGACTC
TGATCGGCTTCTGCTCCGAGAAGGTGATTTACGGCGTTCAGCTGATGGTGACCTGCGATATCTGTCCACAGGAGAGCGACTTTGTACAGGGCTTC
GACTATTACGGCGACCACGGTAACGCACTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370887] SGN-U581272 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183124 [Download][View] Facility Assigned ID: FA0AAD15CA06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0035 Quality Trim Threshold: 14.5